ggKbase home page

cn_combo_scaffold_987_16

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: 14829..15398

Top 3 Functional Annotations

Value Algorithm Source
Protocatechuate 3,4-dioxygenase alpha subunit n=1 Tax=Gordonia sihwensis NBRC 108236 RepID=L7LSA5_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 56.1
  • Coverage: 189.0
  • Bit_score: 210
  • Evalue 1.50e-51
Protocatechuate 3,4-dioxygenase alpha subunit {ECO:0000313|EMBL:GAC62923.1}; TaxID=1223544 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia sihwensis NB similarity UNIPROT
DB: UniProtKB
  • Identity: 56.1
  • Coverage: 189.0
  • Bit_score: 210
  • Evalue 2.10e-51
protocatechuate 3,4-dioxygenase subunit alpha similarity KEGG
DB: KEGG
  • Identity: 56.5
  • Coverage: 184.0
  • Bit_score: 206
  • Evalue 8.10e-51

Lists

This feature is not on any list.

Notes

benzoate degradation Rose Kantor (9/22/14)

Taxonomy

Gordonia sihwensis → Gordonia → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 570
ATGAACCCGATCCCGCCGAGCGTGACGCCGGGGCAGACCATCGGGCCCTTCTTCCACTACGCGCTGCCCTACACGGGCGATCGGGACATCGTCGCCGCCGCGACAGCCGGATCGGTCGTGCTGTACGGCGTCGTCGTTGACGGGCACGGTGTCGGCATACCGGACGCGTTGGTCGAGATCTGGCAGGCGGACCCACAAGGGCGGGTCCCACGGCGGCAGGGCTCTCTCCGGCGGGACGGGCACGTGTTCACCGGTTTCGGCCGCGCGAGTACCGACCCCACCGGGCGGTACGCATTCACAACTCTTCCGCCGGGGGCTGTGGACGGGGGCCTGCCGTTCTTCGCGGTCACTGTGTTCGCGCGTGGGCTGGTCGACCGTCTGTTCACACGGGCATACCTCCCGTTGGAGGGTGCCGAACCCGACGCCGTGCTGCGGGCGGCCGGCGGTCGCGCCTCAACGCTGCTGTGCGAAAGGGCCGACGACGGGCTGCGGTTCGACATCCGTCTCCAGGGCGGAGACGGTGTATCGGAGACCGTGTTCCTGACCTACCCCGGAAACCGGCCTCGATGA
PROTEIN sequence
Length: 190
MNPIPPSVTPGQTIGPFFHYALPYTGDRDIVAAATAGSVVLYGVVVDGHGVGIPDALVEIWQADPQGRVPRRQGSLRRDGHVFTGFGRASTDPTGRYAFTTLPPGAVDGGLPFFAVTVFARGLVDRLFTRAYLPLEGAEPDAVLRAAGGRASTLLCERADDGLRFDIRLQGGDGVSETVFLTYPGNRPR*