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cn_combo_scaffold_987_20

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(17691..18644)

Top 3 Functional Annotations

Value Algorithm Source
MerR family transcriptional regulator n=1 Tax=Burkholderia ubonensis RepID=UPI00016A28E6 similarity UNIREF
DB: UNIREF100
  • Identity: 43.1
  • Coverage: 304.0
  • Bit_score: 215
  • Evalue 1.00e-52
DNA-binding transcriptional regulator CynR similarity KEGG
DB: KEGG
  • Identity: 40.8
  • Coverage: 309.0
  • Bit_score: 213
  • Evalue 6.60e-53
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ACD16546.1}; TaxID=398527 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Bur similarity UNIPROT
DB: UniProtKB
  • Identity: 40.8
  • Coverage: 309.0
  • Bit_score: 213
  • Evalue 3.30e-52

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Taxonomy

Burkholderia phytofirmans → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 954
ATGGGGTCACCGACCATGATGTCGCTGACACTCCGCCAACTGGAGTACCTGCTGGCGGTCGCCGAACACCGCAGCTTCACGCGGGCTGCAAGCGCGCTGTACGTGTCGCAGCCCGCGTTGTCACAGCAGCTCAGCCAGCTCGAGCACACACTGCAGGTCAAGTTGCTCGATCGCACGTCGCGCGAGATTCGTCTGACGCCCGCCGGCCGGGTCTACGTCGAACACGCAGCTCGAGCGCTAGGTGAGCTTCAGTGGGCAAATCGCGCGCTTCATGAGTTCGAGGACCTTTCTCGAGGCGAGGTTCGAATCGGCCTCATACCTCCGGCACTGGTTCTTGTCGGTCCCGCCCTAGTAGCATTCAATGACCGATATCCTGGGATCAAGCTGACGTTGCTGGAAAAAGACCTTGAAGACATCCACAACGCCCTGAGCGATGGCGTCCTTGATCTGGGCATCGGCTTTGACCGCTCAGAGCTGCGCGCCGGCTCGGACAGCGGTATTGACAGCAACCCCCTGCAGCGACCTTCAGTCGGGCTGCTGGTGGGCACCCAACATCCTTGGTTTGGGCGGACCCGCCCTGTCGCGCCTGATGAGCTCGCTGAGCAGCGATTCGTCCTACTCTCGCCGCGTTTTGCTCTGCGGCAGTACATCGACACGTACTGCGGCGAGCACGGCCTCGGTCTCCAAGCCAGCATGGAGGTTGACTCCATCGCGATGATTACCCAGGCCGTATCTGACGGCCACCTTTGTACCTTCTGCTTCACGGCTCTCGCCGATCGTGGCGACCTGACGTCGGTACCTATGGATCCGCCACTCACCACACCGAGGGTGTTGCTACTTTGTAGGGGGCGCTCGACAAGTACTCTTGCCGCCCGGGCCGTTGTCGCGAGTCTGCTTGATGCAGACGGCGCGTCCTACCAAGCGCCGGCTTTCGTCCGCATCGACTCAGCTTGA
PROTEIN sequence
Length: 318
MGSPTMMSLTLRQLEYLLAVAEHRSFTRAASALYVSQPALSQQLSQLEHTLQVKLLDRTSREIRLTPAGRVYVEHAARALGELQWANRALHEFEDLSRGEVRIGLIPPALVLVGPALVAFNDRYPGIKLTLLEKDLEDIHNALSDGVLDLGIGFDRSELRAGSDSGIDSNPLQRPSVGLLVGTQHPWFGRTRPVAPDELAEQRFVLLSPRFALRQYIDTYCGEHGLGLQASMEVDSIAMITQAVSDGHLCTFCFTALADRGDLTSVPMDPPLTTPRVLLLCRGRSTSTLAARAVVASLLDADGASYQAPAFVRIDSA*