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cn_combo_scaffold_1203_6

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: 5477..6925

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA-directed DNA polymerase {ECO:0000313|EMBL:CCM65197.1}; EC=2.7.7.49 {ECO:0000313|EMBL:CCM65197.1};; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candid similarity UNIPROT
DB: UniProtKB
  • Identity: 74.7
  • Coverage: 482.0
  • Bit_score: 750
  • Evalue 1.10e-213
Putative RNA-directed DNA polymerase n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4Z795_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 74.9
  • Coverage: 482.0
  • Bit_score: 752
  • Evalue 2.80e-214
RNA-directed DNA polymerase similarity KEGG
DB: KEGG
  • Identity: 67.2
  • Coverage: 473.0
  • Bit_score: 644
  • Evalue 3.00e-182

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Taxonomy

Candidatus Microthrix parvicella → Candidatus Microthrix → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1449
GTGAACATCGGCGATCCGTGGCCCGACCTCGACGAGGCACAGGCGCGGGTACTCGCGATGCAGAGGAAGCTGCACCACTGGGCGAAGACCGACCCTGGTCGACGCTTCGACGATATCCACAACCTCGTCTATGACCCGTTCTTCCTCGTCGTGGGGTGGGAACGGGTGCGGGGCAACAAGGGCGCGCGCACCGCCGGGGTCGACGGGATCGCACCGAGATCGGTCGGCCTCGCCGCCGCGGACATGCTGACCGGGCTGCGAGCACAGCTCAGGACCGGGCAGTTTGTCCCACAGCGGGTGCGGGAGAAGGCGATCCCGAAGGCGTCGGGCAAGGTCCGGCGGCTGGGGATCCCGACGACCGCGGACCGGGTCGTGCAGGCCGTGTTGAAGCTGGTGCTCGAGCCGATCTTCGAGGCGGACTTCCAGCCATGTTCGTATGGCTTCCGCCCGAGGCGCCGGGCCCAGGACGCGATCGCCGAGATCCATTACCTCGCCTCACCGACTCGGAACTACGAGTGGGTGTTCGAGGCCGACATCACGGCGTGCTTCGACGAGATCGACCACACCGCGCTGATGGCGCGGGTGCGTGGCCGGGTCTCCGACAGGCGGGTCCTGGGCTGGGTGACGGCGTTCCTGCGAGCCGGAATCCTCTCCGAGGACGGCGTGCACCGTGCGACGGTCACCGGCACCCCGCAGGGCGGAATCCTGTCTCCGCTGTTGGCCAACATCGCCCTGTCCGTGCTCGACGAGCACTTCGCCGCCAAGTGGGAGGCGCTCGGCCCGTCTTGGACGCGCGCCAAGCACCGCCGCGCCGGCGGCCCGGTCATGAAGATCGTCCGCTACGCCGACGACTTCGTGGTCATGGTCGGTGGTCGGCGTGAGCACGCTGACGCGCTCTGGGACGAGATGGCCACGGTCCTCGCGCCGATGGGCCTGCGCCTGTCGGTGGAGAAGAGCAGGATCTGCCACATCAACGAGGGGTTCGCCTTCCTGGGCTGGCGCGTCCAGCGCCGAGCTTGGCGCAGCCGGACCGGGAAGCGGGCGGTCTATACCTTTCCGTCGAAGAAGGCGTTGGCCTCGATCGTCGCGAAGGTGCGGACGCTGACCCGCCGCAGGAATCATCGAACGCTCGCAGACCTGTTGCGCCGGTTGAATCCGGTGCTGCGGGGCTGGTGCACCTACTTCCGTCACGGTGTGTCCTCGCGGACCTTCGGCTATGTCGACCACTTCGCCCTCTGGCGGATCGTCGGCTGGCTCCGCAAACGACACCTCGGGCTGAACATGCACACCCTGGTCCGGCGCTTCCTGCCCGGCTGGCAGGTCCGCGCCGGAGGAATCGAGATGTTCCGCCCCGAGACGGTGGAGATCATCCGCTACCGCTACCGGGGCACGAAGATTCCCACGCCATGGGCGAGCGCACCGACCAGGATCACCGTCCCAGTGGCATGA
PROTEIN sequence
Length: 483
VNIGDPWPDLDEAQARVLAMQRKLHHWAKTDPGRRFDDIHNLVYDPFFLVVGWERVRGNKGARTAGVDGIAPRSVGLAAADMLTGLRAQLRTGQFVPQRVREKAIPKASGKVRRLGIPTTADRVVQAVLKLVLEPIFEADFQPCSYGFRPRRRAQDAIAEIHYLASPTRNYEWVFEADITACFDEIDHTALMARVRGRVSDRRVLGWVTAFLRAGILSEDGVHRATVTGTPQGGILSPLLANIALSVLDEHFAAKWEALGPSWTRAKHRRAGGPVMKIVRYADDFVVMVGGRREHADALWDEMATVLAPMGLRLSVEKSRICHINEGFAFLGWRVQRRAWRSRTGKRAVYTFPSKKALASIVAKVRTLTRRRNHRTLADLLRRLNPVLRGWCTYFRHGVSSRTFGYVDHFALWRIVGWLRKRHLGLNMHTLVRRFLPGWQVRAGGIEMFRPETVEIIRYRYRGTKIPTPWASAPTRITVPVA*