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cn_combo_scaffold_1203_10

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: 9143..9946

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Sciscionella marina RepID=UPI0003746C09 similarity UNIREF
DB: UNIREF100
  • Identity: 36.4
  • Coverage: 242.0
  • Bit_score: 153
  • Evalue 3.10e-34
Transcriptional regulator {ECO:0000313|EMBL:EOD67371.1}; TaxID=1292037 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vancoresmycina D similarity UNIPROT
DB: UniProtKB
  • Identity: 36.4
  • Coverage: 253.0
  • Bit_score: 143
  • Evalue 4.60e-31
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 32.9
  • Coverage: 252.0
  • Bit_score: 140
  • Evalue 7.80e-31

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Taxonomy

Amycolatopsis vancoresmycina → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 804
ATGGACGAGAAGGCAGCGACGCCTTCGGGCCGGGGCGGCCCTCGCGGGCAGGTGTCCGCTCCCACCCCGCCGACCGGCCGGGCCGATGGCCGCGACCTACAGGTGCTGGCACGGGCGAGCAGCGTGCTGAAGATGTTCAGCGTGGACCGCGCATGCATCGACCTCGCTGCAGCGACCAGCGAGCTGGGACTCAACCGATCGACGGTCTACCGCTATCTGACCGCGATGGTGAAGCACGGCCTCCTCGTTCACACCCAGGGCAGCGGATACAGCCTCGGCCCCTTGGCGTCCCGAGTCGGGCTGCTCGCCCTCGATCGGGCCCCGTTGATCAGCCGGGCCGACCCGGTGATGCAGATGCTTTCCGAGAAAGTGCACGAGACGTCGACATTGTCCGTCTGGGGCGGCAGTGGTCCACTGGTTGCGCGTGTACACGACAAGCAGAGCCGTTTCATCAGGATCTCGGTCGCCGTCGGATCGACATTGCCGATCAACACGGCACAGGGTCAAGTATTCCTCGCCCACCTCACGGACGAGCGGAGCATCGAGCGTGCCACACTCGGGCTGACGGATTCGGAACGAAAAGGATTGCTCGACCGACGCGAGGAAGTGCGGCGGACGCGGATCGCTTTCAGCGATGCGTCGGCAGACGGACTCAGGTGCGTCGCCTCGCCGATCTTTGGCCCCGATGGCTCCCTTGCCGCCACGCTGGCCCTGATCGGAACCCCCAACCGCATCCCGGATCACGCCGGAGACGCCCGGGTCGACGCTCTGATGAAGGCGGCTCGGAGTCTTTCCGTCATCTGA
PROTEIN sequence
Length: 268
MDEKAATPSGRGGPRGQVSAPTPPTGRADGRDLQVLARASSVLKMFSVDRACIDLAAATSELGLNRSTVYRYLTAMVKHGLLVHTQGSGYSLGPLASRVGLLALDRAPLISRADPVMQMLSEKVHETSTLSVWGGSGPLVARVHDKQSRFIRISVAVGSTLPINTAQGQVFLAHLTDERSIERATLGLTDSERKGLLDRREEVRRTRIAFSDASADGLRCVASPIFGPDGSLAATLALIGTPNRIPDHAGDARVDALMKAARSLSVI*