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cn_combo_scaffold_1334_19

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(17181..18659)

Top 3 Functional Annotations

Value Algorithm Source
MFS transporter n=1 Tax=Janibacter hoylei PVAS-1 RepID=K1DX29_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 48.6
  • Coverage: 461.0
  • Bit_score: 439
  • Evalue 4.00e-120
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 53.3
  • Coverage: 448.0
  • Bit_score: 478
  • Evalue 2.20e-132
  • rbh
Putative MFS-type transporter yhcA {ECO:0000313|EMBL:AHK31671.1}; TaxID=543736 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus PD630.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.3
  • Coverage: 452.0
  • Bit_score: 473
  • Evalue 2.70e-130

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Taxonomy

Rhodococcus opacus → Rhodococcus → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1479
GTGGTGCGCGCTGACCGCCGTGGCCGTGCCCGGCGTCCCAACCTGATCCTCGCGGTCCTCGCGACGTGCGGAACGGTCACGTCCCTGCAGCAGACGACGATCATCCCGCTGGTGCCGCAGCTTCCGGAGCTGCTCGGTACGACGCCGGCGGGCGCGTCGTGGATGGTGACGGTGGTGCTGCTGTCGGGGGCGGTCGCGACCCCGGTGGTCACGCGCCTGGCCGACACCTACGGCAAACGCCGGCTGATCGTCGCCAGCCTCGCGGTGATGGTCGTCGGCTCGGCCGTCGGGGCGTTCGCCGACACGCTCACCGTCGGCATCGTCGCGCGGGCGCTGCAGGGGGTCGGGGTCGCGCTGGTCCCGGTGGCCATCGGCGCGATGCGCGACGAGCTGCCGGCCGAGAAGGTGCCGCTCGGGGTGGCGGTGATGAGTGCGACGCTCGCGGTCGGCGCGGGCGCGGGCCTGCCGGTGTCGGGGGTGATCGTCGCGCACCTGGGCTGGCACGCGATCTTCTGGGTCACCGGTGTCGCGGGCCTGCTGGTGCTCGTCGCGGTGCCGTTGGCGCTCGGACCGTCGCGGCCGGGCACGGCCCGCGGGTTCGACGTCCCCGGCACCCTGCTGCTTTCGGCCGGCCTCGTCGGGGTGCTGCTGGCACTGACCCAGGGCGCCGGGTGGGGTTGGGGCTCGCCCGCGACGATCGCGTGCGCGACCGGCGGACTCGTCCTGCTGGTCCTCCTGATCCCGGTGCAGCTGCGGGTACGGACACCGCTGGTCGACGTCCGGGTGGCCCGCCGGCCCGCGATCCTGCTGGTCAACCTCACCGCGCTGCTGCTGGGCTTCGCGATGTTCGTGAACCTGCTGATCTCCGCGCAGCTGCTGCAGCTGCCCGTCGAGACCGGCTACGGACTGGGCTTCGGCAGCGCCGCCGCCGGGGTGTGGCTCGCGCCGGGGGCGATCGCCTTCGGGTTCATGGCCCCGCTCGCGGCGACGATCATCCGCCGCATCGGTGCCGGTGCCGCGCTGTTCATCGGATCGGCCGAGATGTGCGCCGCCTACGCGTGGCGGGCGTTCTTCAGCCACGAGCTCTGGCAGATCGTCACCGGGTCGATGCTGGTCACGATCGGGACGTCGCTGGCCTACGCCGCCATGCCGGTGCTGCTGATCGGGTCGGTGCCCGCCGGTGAGACGTCGTCGGCCAACGGGCTGAACACGTTGCTGCGCTCGATCGGCACGGCCGGTTCCAGCGCCGCGGCGGCGGCGATCACGTCGGCGGCGCTGCTGCAGGTGAACGGTGTCGCGCACCCGAGCTTCGGCGGGTTCATGACGGTGTTCGCCATGGCCGCCGGAGCCGCCGGCGCCGCGGCGGTCGTCGCCGCGTTCCGGTGGTGGATCCGTTCCGCGGCACCGGTCGACGCCGCCGCGGCGACGACGTCCCGGCCACCGGAACCTGCGCTTCGCGCGGGCCCGACCCGTTCCTAG
PROTEIN sequence
Length: 493
VVRADRRGRARRPNLILAVLATCGTVTSLQQTTIIPLVPQLPELLGTTPAGASWMVTVVLLSGAVATPVVTRLADTYGKRRLIVASLAVMVVGSAVGAFADTLTVGIVARALQGVGVALVPVAIGAMRDELPAEKVPLGVAVMSATLAVGAGAGLPVSGVIVAHLGWHAIFWVTGVAGLLVLVAVPLALGPSRPGTARGFDVPGTLLLSAGLVGVLLALTQGAGWGWGSPATIACATGGLVLLVLLIPVQLRVRTPLVDVRVARRPAILLVNLTALLLGFAMFVNLLISAQLLQLPVETGYGLGFGSAAAGVWLAPGAIAFGFMAPLAATIIRRIGAGAALFIGSAEMCAAYAWRAFFSHELWQIVTGSMLVTIGTSLAYAAMPVLLIGSVPAGETSSANGLNTLLRSIGTAGSSAAAAAITSAALLQVNGVAHPSFGGFMTVFAMAAGAAGAAAVVAAFRWWIRSAAPVDAAAATTSRPPEPALRAGPTRS*