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cn_combo_scaffold_1375_17

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: 15534..16313

Top 3 Functional Annotations

Value Algorithm Source
Putative IclR family regulatory protein n=1 Tax=Pseudomonas sp. CF161 RepID=S6IND5_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 34.5
  • Coverage: 252.0
  • Bit_score: 143
  • Evalue 3.20e-31
transcriptional regulator, IclR family similarity KEGG
DB: KEGG
  • Identity: 35.7
  • Coverage: 238.0
  • Bit_score: 149
  • Evalue 9.50e-34
Transcriptional regulator, IclR family {ECO:0000313|EMBL:BAP46265.1}; TaxID=1028989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Ps similarity UNIPROT
DB: UniProtKB
  • Identity: 35.7
  • Coverage: 238.0
  • Bit_score: 149
  • Evalue 4.70e-33

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Taxonomy

Pseudomonas sp. StFLB209 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 780
ATGGAGCCGTCCGAAAGCTCACTCACGCAGTCCGACGCACCGTCGCGCGACCGACGGGCGCTCGTTCAGTCGGTCTCGCGCGCACTCGACATCCTCGACCTGCTGCGCGAAGCCGGTCGCCCGATGAGTCCTGCAGACCTTGCCAAGGCGGCCGACCTGGACCGCACGGTGGTGTACCGGCTCCTCCGAACCTTGAGCCAACGCCAGATGGTGAGCGAGGGAGAGAGCGGCTTCACTCTGGGCCCGGAGACGGTACTGCTGGGTCACCGCTACCTGGACGCCCTTCCACTTCGCCGCATAGCGCTCCCATACATGATCGACTTGCAAACCAAGTTCCTCCAGGATCGCCCCTGGACACTCGCCCTCTTCATAGCCATCGGACGACTCGGCGCCGTGGTCGAACGCATGTGGACCGCAGCGACGCCGCTGGGGCTCGTGCTCGACCAAGGTGCAACGTCGCCGCTCGAGGTCACTGCTGCGGGACGAGGCCTCCTGGCCTATCTCGACGCCGCCGAGGCGGAGGCCATCCTGAAAGAGCAGTACTCAGCCCTGCGGCCGTCACTCGAGGAGATCCGGGCAGCCAATGGCGTGGCACTGCTCCACCCGTCGACGAGCAACGGCCTCGAGGCGGTTGCATGCGTGATCCGCCGACCCGACGGAACCCCCGTCGCAGCGATCGGGGTCGGCGGACTCGACCTGGGAGCTGAGCTCGCCACCGACTCGACCCTCGCAACTCAACTGCGACACGCAGCCGACGCGATCGGCCGGATGATCTACTAG
PROTEIN sequence
Length: 260
MEPSESSLTQSDAPSRDRRALVQSVSRALDILDLLREAGRPMSPADLAKAADLDRTVVYRLLRTLSQRQMVSEGESGFTLGPETVLLGHRYLDALPLRRIALPYMIDLQTKFLQDRPWTLALFIAIGRLGAVVERMWTAATPLGLVLDQGATSPLEVTAAGRGLLAYLDAAEAEAILKEQYSALRPSLEEIRAANGVALLHPSTSNGLEAVACVIRRPDGTPVAAIGVGGLDLGAELATDSTLATQLRHAADAIGRMIY*