ggKbase home page

cn_combo_scaffold_1517_12

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(10330..10938)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, PadR-like family n=1 Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8AVJ9_FRADG similarity UNIREF
DB: UNIREF100
  • Identity: 53.5
  • Coverage: 213.0
  • Bit_score: 204
  • Evalue 9.00e-50
PadR-like family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 54.0
  • Coverage: 213.0
  • Bit_score: 205
  • Evalue 1.10e-50
Transcriptional regulator, PadR-like family {ECO:0000313|EMBL:AEH11313.1}; TaxID=656024 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca g similarity UNIPROT
DB: UniProtKB
  • Identity: 54.0
  • Coverage: 213.0
  • Bit_score: 205
  • Evalue 5.70e-50

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Frankia symbiont of Datisca glomerata → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 609
GTGCTCGGGCTGCTCACCGAGCGGCCGATGCATCCCTACGAGATGGCGACGACGCTGCGCAGCCGGGCCAAGGAGGAGAGCATCAAGCTCAACTACGGCTCGCTGTACTCGGTCGTCGACTCGCTCACCAAGCGCGGCCTGATCGAGCCGGCCGAGACGGTGCGCGACGGGCGACGCCCCGAGCGGACGGTCTACACCGTCACCGAGCCCGGCCGGGTGGAGTTCGCCGACTGGCTGAGCGAGCTGATCTCGGTGCCCGTCAAGGAGTTCACGAACTTCGAGGCGGCGCTGTCGATGCTGCCCGGGCTGCCGCCGGACGTCGTCGCCGACCTGCTGCGGCTGCGCGTGCACCGGCTCACCTCGGAGGTCGACGCGGGCGAGTCGGCGTTGCGCCGCAGCGACGGCGACGGCCTGCCACGGCTGTTCTCGATCGAGTTCGAGTATCGGCTGACCCTGGCCCGCGCGGAGCTGGCGTTCGTGACGACGCTGCTCTCGGAGCTCGACGACGGCCGGCTCGAGGGCTACCAGATCTGGCGCACCATCCACGAGAGCGGCGAGTCGATCCCGGACGCCGAGCTGATCGCGCGCCTTAAAGCCGACCGCACGTGA
PROTEIN sequence
Length: 203
VLGLLTERPMHPYEMATTLRSRAKEESIKLNYGSLYSVVDSLTKRGLIEPAETVRDGRRPERTVYTVTEPGRVEFADWLSELISVPVKEFTNFEAALSMLPGLPPDVVADLLRLRVHRLTSEVDAGESALRRSDGDGLPRLFSIEFEYRLTLARAELAFVTTLLSELDDGRLEGYQIWRTIHESGESIPDAELIARLKADRT*