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cn_combo_scaffold_1517_22

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(20129..21061)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter permease n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI00026281C4 similarity UNIREF
DB: UNIREF100
  • Identity: 65.5
  • Coverage: 307.0
  • Bit_score: 389
  • Evalue 3.90e-105
inner-membrane translocator similarity KEGG
DB: KEGG
  • Identity: 65.1
  • Coverage: 307.0
  • Bit_score: 388
  • Evalue 2.50e-105
Inner-membrane translocator {ECO:0000313|EMBL:AIJ21398.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 23 similarity UNIPROT
DB: UniProtKB
  • Identity: 65.1
  • Coverage: 307.0
  • Bit_score: 388
  • Evalue 1.20e-104

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Taxonomy

Amycolatopsis methanolica → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 933
GTGCTCGCGACGTCGGCCGGGCTCGCTGTCGTGGTGATCCTGGTCGTGATCGCGGTCCTGCGCGCAGGCAGCGCGACGGTCGCCTCGCAGGCCGTCGCCACGGGCCTGATGACCGGCGCCGTCTATGGCCTCATCGCGATGGGGCTCACGCTGATCTTCGGCGTCCTCGACATCGTCAACTTCGCCCACGGTGCATTTCTCGCTGTCGCGCTGTACGTGTCGTTCGTCGTCGTCGACAACTGGGGTCTGCACCCGGTCATCGCCCTGCTCATCTGCGTTCCATTGATGTTCCTGCTCGGTGCCGCCGCCCATCGGGGCGTCCTGTCGTTCGCGATCGGGAGGCCGCTGGAGAACCAGCTGCTACTCACCCTCGGCATCTCATTGCTCATCGAGAACGTCCTGCTGATGGTGTTCGGCCCCAACCCGCGCTCGGTCGCGCTCCCCGGCGAGCGGTCTTACGACGTCCTCGGCGTCGTCACCAACCTGTCGCGGGTGCTGGCGTTCGTGATGGCGCTGGTGCTGGCGACCGCGCTCTACGTGCTGCTGCAACGGACACGTCTCGGCACCGCGATCCGCGCGGTCGCGGCCAACCACACCGGCGCCGAGCTGGTGGGCATCGACACCCGCCGCATGTACACGCTCACCTTCGCGATCGGTACCGCGTGTGCCGGCGCCGCAGGCGTTCTGATGGCACCGATGACGACGATCCAGCCGACCAGCGGCGAGGTGTTCAACATCCTCGCGTTCGTCGTCGTCGTCCTGGGCGGAATGGGCAACGTCGTCGGCGCTCTGGTCGGCGGCCTCCTCGTCGGACTCACCGAGCAGCTCGGCGGCCTCTACTTCCCCGGCCAGAGCCCGCTGCTGTCCGTGTTCGTCGTGTTCGTGCTGGTGCTCTTCCTGCGCCCGCAGGGGCTTTTCGGAAGGCGGTCGTGA
PROTEIN sequence
Length: 311
VLATSAGLAVVVILVVIAVLRAGSATVASQAVATGLMTGAVYGLIAMGLTLIFGVLDIVNFAHGAFLAVALYVSFVVVDNWGLHPVIALLICVPLMFLLGAAAHRGVLSFAIGRPLENQLLLTLGISLLIENVLLMVFGPNPRSVALPGERSYDVLGVVTNLSRVLAFVMALVLATALYVLLQRTRLGTAIRAVAANHTGAELVGIDTRRMYTLTFAIGTACAGAAGVLMAPMTTIQPTSGEVFNILAFVVVVLGGMGNVVGALVGGLLVGLTEQLGGLYFPGQSPLLSVFVVFVLVLFLRPQGLFGRRS*