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cn_combo_scaffold_1517_30

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: 27925..29184

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI000380997E similarity UNIREF
DB: UNIREF100
  • Identity: 56.2
  • Coverage: 409.0
  • Bit_score: 447
  • Evalue 1.30e-122
Amino acid/amide ABC transporter substrate-binding protein, HAAT family {ECO:0000313|EMBL:EXG81615.1}; Flags: Precursor;; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiacea similarity UNIPROT
DB: UniProtKB
  • Identity: 55.1
  • Coverage: 405.0
  • Bit_score: 440
  • Evalue 3.70e-120
extracellular ligand-binding receptor similarity KEGG
DB: KEGG
  • Identity: 56.2
  • Coverage: 400.0
  • Bit_score: 429
  • Evalue 1.30e-117
  • rbh

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Taxonomy

Cryptosporangium arvum → Cryptosporangium → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1260
ATGGCCAGACACAGTCGGCTCGGCGCGATCGCCGCGCTCGGCGTCGCCGTCTGCACGTTGCTCGCAGGATGTGGCGGTTCGTCCGGCGGGGGAGGGTCGTCGGTTGGAGGGAGCGATGCGCCGATCATCATCGGCTCACTGCACCCGCTCAGCGGTGCGTACGCCGCAGACGGCCAGCAGATCGACAACGGCGCGAAGATCGCCGTCGACGAGATCAACGCTGCCGGCGGGATCAAGTCGCTCGCTGGCCGCAAGCTGCAATTGTCCTCGGGCGACACCAAGGGCAGCCCGGAAACCGGCCAGAGCGAGGCACAGCGCCTTATCCAGTCCGGCGCGGTCGGCCTGATCGGCGCCTACCAGAGCAGTGTGTCGGCCACAGTCGCTGCGGTCGCCGAACGCAACACCGTCCCGTTCATCATCGACATCTCCAACGATGTCAAGCTGCTGAACCAGGGCTACAAGTACTCGTTCCGTATCCAGCCGAACTCCGACCAGTTCGCCAATGACGGCGCGACCTATCTCAAGGAGATCAGCGACGCGGCCGGGAAGCCGGTGACCAAGGTCGCGCTGCTGCACGAGCAGACCGCGTTCGGCACGGCCGTCGCGCAGGCGTTCGTCCCGAAGGCGGCATCGCTGGGTATCACGGTCGACCCCGTCATCAGCTACGACGCCGCCAACGTCTCCGATCTGACGACGCAGGTCGCTCGGGCCAAGGCTGCGGGAGCGCAGGTCATCGCCGCCGCGGGGTACTACCGCGACGGAGTCCTGCTGGCGCAGGCGATCAACTCGGTCAAGCCGGACCTGCTGGCGGTCTACGGCGTCGCCGACGGTGCGTTCGACATCCCGACGTTCTCGAAGGACGCCGCGCCGCAGGGCGAAGGTTACATCGACGTCAGCTACCACATCGACAGCACCAAGCCCTATGCGCATGCGTTCACCAAGGCCTACCAGGACCGCTTCAATGACGTGCCGCGAACCGGCGCCGGCTACGGCTACGACTCCGTGAAGGTGATCGCCGCCGGTCTGGAGAAGGCAGCCTCCGACGACCCGACGAAGCTGCGCGACGCCATCGCGGGTGCGTCCGTCGACGCGGTCACCGCCAGTGCTGGTCCGATCGAGTTCCTGCCCAACGGTGAGAACAAGAACGCGCAGCCCGTCGTGATGCAGGTCCAGGGGGGTAAGCCGCTCCAGGTGTACCCGAAGAGTCTCGCCGAGAAGCCGATCATCTTCCCGGTCCCGCCCACCGGCACCACCCCGTGA
PROTEIN sequence
Length: 420
MARHSRLGAIAALGVAVCTLLAGCGGSSGGGGSSVGGSDAPIIIGSLHPLSGAYAADGQQIDNGAKIAVDEINAAGGIKSLAGRKLQLSSGDTKGSPETGQSEAQRLIQSGAVGLIGAYQSSVSATVAAVAERNTVPFIIDISNDVKLLNQGYKYSFRIQPNSDQFANDGATYLKEISDAAGKPVTKVALLHEQTAFGTAVAQAFVPKAASLGITVDPVISYDAANVSDLTTQVARAKAAGAQVIAAAGYYRDGVLLAQAINSVKPDLLAVYGVADGAFDIPTFSKDAAPQGEGYIDVSYHIDSTKPYAHAFTKAYQDRFNDVPRTGAGYGYDSVKVIAAGLEKAASDDPTKLRDAIAGASVDAVTASAGPIEFLPNGENKNAQPVVMQVQGGKPLQVYPKSLAEKPIIFPVPPTGTTP*