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cn_combo_scaffold_3083_18

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(15505..17277)

Top 3 Functional Annotations

Value Algorithm Source
GAF modulated sigma54 specific transcriptional regulator, Fis family n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SE69_GEOOG similarity UNIREF
DB: UNIREF100
  • Identity: 58.8
  • Coverage: 607.0
  • Bit_score: 657
  • Evalue 1.50e-185
GAF modulated sigma54 specific Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 58.8
  • Coverage: 607.0
  • Bit_score: 657
  • Evalue 4.20e-186
  • rbh
GAF modulated sigma54 specific transcriptional regulator, Fis family {ECO:0000313|EMBL:ADB74541.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatop similarity UNIPROT
DB: UniProtKB
  • Identity: 58.8
  • Coverage: 607.0
  • Bit_score: 657
  • Evalue 2.10e-185

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Taxonomy

Geodermatophilus obscurus → Geodermatophilus → Geodermatophilales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1773
ATGGCCGAGATGTCGGACCGACGGCTGCTGCTCGCCTCCGCCCGCGCCGACCTGCTCGACGGCACCGATCTCCTCGACGCCCGCTCCCCCGCCCATCCAGGCGTCCCCGACCACGTCGCGGCGTCATGGCGGCGCAGCGTCGCCGGAGGCGTGCACCCCGACGGCGTCGAGAGCCCGTACTTCGAGGAGCTGGACTACGGGTCGCGGCTGGTCCGCTGCGCGCAGCCCGTCATCGAGCAGCTGTCCGAGCAGATCGCCGACGTCCCGATGTGTGTCGCGCTGACCGACAACCGGGCCCGCATCCTGGTGCGCCGCGACAGCAGCCACGGCATCGGGCGCATCCTCGACCGCGTCTCCTTCGCGAAGGGCTTCGGCTACGAGGAGGGCGACGTCGGCACCAACGGCGTCGGCACGGTGCTGGAGTTCGGCGAGTCGGTGCACATCGTCGGGGCCGAGCACTTCGTCGACACCCTGCAGAGCTTCGCGTGCGCGGGCGCCCCGGTCCGCGACCCGTTCACCGGCCGCATCGAGGGTGTCCTCGACATCAGCTGCCTGTCCGACCACTCGACGCCGATCATGCACAGCCTCGTGCGCTCGGCGGCCCGGCGCATCGAGCACAACCTCGTCCTCGACCGTGACCAGGCACAACAGGCACTTTTCGACGTCTACTCCCGCGTCGACTCCCGCACCCGCGACGCGGTCGTCGCCGTCGGGGCACGGTTCGTCGTCGCCAACACGGCGATGCGGACGCTGCTCGCCGCGCCCGACCAGGAGGCCCTGCACGACCAGGTCCGGTTCATGACACAGCGGCACGCAACCGTCGACCACGAGCTCGACCTGCCCTCCGGCGTACGCGTGCGGCTGCGCGGCTCGACCGTGACACTCGGCGACGACGTCGCGGGCATGGTCTGCCTGGTCACGCTGCTGCGGGAGGCGGGCTCGGCCGAGCCGATCCTGCGCCCCGCCACTGCGCTGCCGGGGCGGGCGGCCGCGGGCAGCAGCTCACCCGCCTGGTGCGCCGCGGCGTCGACGGTGCGCCGGGCGGTGCGCGCCGGCGAGACCGTGCTCGTCCTCGGGGAGCCGGGCAGCGGCCGGTTCACGGTGCTCGCCTCCGCGCGCCCCGAGACCTGTGTCCGACGCATCGAGGCCGCCGATGTCGTCTCCGACCCCGACGCCGTCGCCCGCAGTCTCACCACGGCCGGGCCGGACGTCACCCACGTGTTGTGCAACATCGACCAGCTCCCCGAACAGACGGCCGACGACCTCGTCGAACGTCTCGAGGGGCTCGGGCGCCCCGTCGCGCTGCTCGGGGCCACGTCGGCCGCCGACGACCGCACCCCCCGGCAGCCGCTGCTGGCCCTGTTCCGGCAGTCCGCGACGCTCCCGCCGCTGCGGCACCGCACGGCCGACCTGCCGGTGCTCACCCGTGAGCTCCTGCGCGACCTCGCACCGCACCGCGAGCTGCAGCTCTCCCCCGAGGCGTTCCGCGTCCTCGGCCGCCACCGCTGGCCCGGCAACATCCGCGAGCTGCGCGACGTCCTCGCCGACGCCGTCGCCCGCCGTCCCGTGGGCGTCATCGAGGCCGGCGACCTGCCCGCGCACTGTCAGAGCAGCTCCCGCAGCACCCTGCGCCAGGTCGACCGGATCGAACGCGACGCCATCGTCGACGCGCTGCGGCAGGCCCGCGGCAACCGCAAGGCCGCCGCCGCCGCGCTCGGCCTCGCCCGGTCCACGCTGTACCGCAAGATCCGCCACTACGGCATCACCGACTGA
PROTEIN sequence
Length: 591
MAEMSDRRLLLASARADLLDGTDLLDARSPAHPGVPDHVAASWRRSVAGGVHPDGVESPYFEELDYGSRLVRCAQPVIEQLSEQIADVPMCVALTDNRARILVRRDSSHGIGRILDRVSFAKGFGYEEGDVGTNGVGTVLEFGESVHIVGAEHFVDTLQSFACAGAPVRDPFTGRIEGVLDISCLSDHSTPIMHSLVRSAARRIEHNLVLDRDQAQQALFDVYSRVDSRTRDAVVAVGARFVVANTAMRTLLAAPDQEALHDQVRFMTQRHATVDHELDLPSGVRVRLRGSTVTLGDDVAGMVCLVTLLREAGSAEPILRPATALPGRAAAGSSSPAWCAAASTVRRAVRAGETVLVLGEPGSGRFTVLASARPETCVRRIEAADVVSDPDAVARSLTTAGPDVTHVLCNIDQLPEQTADDLVERLEGLGRPVALLGATSAADDRTPRQPLLALFRQSATLPPLRHRTADLPVLTRELLRDLAPHRELQLSPEAFRVLGRHRWPGNIRELRDVLADAVARRPVGVIEAGDLPAHCQSSSRSTLRQVDRIERDAIVDALRQARGNRKAAAAALGLARSTLYRKIRHYGITD*