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cn_combo_scaffold_4150_12

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(10242..10580)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Rhodococcus ruber RepID=UPI00037C445F similarity UNIREF
DB: UNIREF100
  • Identity: 44.8
  • Coverage: 105.0
  • Bit_score: 76
  • Evalue 2.70e-11
Uncharacterized protein {ECO:0000313|EMBL:EWT02865.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-2447 similarity UNIPROT
DB: UniProtKB
  • Identity: 49.4
  • Coverage: 85.0
  • Bit_score: 79
  • Evalue 4.40e-12
LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 47.1
  • Coverage: 85.0
  • Bit_score: 76
  • Evalue 7.50e-12

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Taxonomy

Intrasporangium oryzae → Intrasporangium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 339
ATGGTGCGCAGGTTCCCCGGCCCCGTCCGGCTGCTCCTGCTCACACGTCGGGACCCGCAGCTGCCGCTGGCCCGGCTGCGCCTCGACGGCCGCCTGCACGACATGAGGTCCGACGAGCTGGCCACGGACGCGGCGGAGGTCGCCGACCTGCTGACCAAGATCGACATGACGCTCACCGCCGCGCAGGTCGACGTGCTCGTCGAGCAGACCGGGGGCCGGCCCGCGGGGGTGCGGCTCGCGGCGCAGTCACTGGTCGTCGCCAGGTGCAACAAAGGGACCTCCGCCCGAGCCGGCCAAAGAGGCGCGCAAGACCGGGTCCGAGGTGGCGGCGTCGCCTGA
PROTEIN sequence
Length: 113
MVRRFPGPVRLLLLTRRDPQLPLARLRLDGRLHDMRSDELATDAAEVADLLTKIDMTLTAAQVDVLVEQTGGRPAGVRLAAQSLVVARCNKGTSARAGQRGAQDRVRGGGVA*