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cn_combo_scaffold_4449_1

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: 2..364

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L20 n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CLG8_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 91.7
  • Coverage: 120.0
  • Bit_score: 215
  • Evalue 2.30e-53
50S ribosomal protein L20 similarity KEGG
DB: KEGG
  • Identity: 91.7
  • Coverage: 120.0
  • Bit_score: 215
  • Evalue 6.50e-54
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" sou similarity UNIPROT
DB: UniProtKB
  • Identity: 91.7
  • Coverage: 120.0
  • Bit_score: 215
  • Evalue 3.20e-53

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 363
AACGCCCAGAAGAAGCGCCGCTCGACCCTCGAGCAGGCGAGCGGCTACCGGGGCCAGCGCTCCCGCCTGTACCGCAAGGCGAAGGAGCAGATGCTCCATTCGCTGAACTACGCCTACCGCGACCGTCGCGCCAAGAAGGGCGAGTTCCGGCAGCTGTGGATCACCCGCATCAACGCGGGCGCCCGCGCCAACGGCATGACCTACAACCGCTTCATCCAGGGTCTCAAGGCCGCGGGTGTCGAGGTCGACCGCAAGGTCCTGTCGGAGCTCGCGATCAGCGACCCGGCCGCCTTCACCGCGCTCGTCGAGCTCTCCCGGGCCAACGTGCCCGCGCACGACACGCAGAAGGACTCCGCGGCCTGA
PROTEIN sequence
Length: 121
NAQKKRRSTLEQASGYRGQRSRLYRKAKEQMLHSLNYAYRDRRAKKGEFRQLWITRINAGARANGMTYNRFIQGLKAAGVEVDRKVLSELAISDPAAFTALVELSRANVPAHDTQKDSAA*