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cn_combo_scaffold_1542_24

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(32108..32497)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; T similarity UNIPROT
DB: UniProtKB
  • Identity: 55.4
  • Coverage: 130.0
  • Bit_score: 131
  • Evalue 6.60e-28
Ribonuclease VapC n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0JTE6_SACES similarity UNIREF
DB: UNIREF100
  • Identity: 55.4
  • Coverage: 130.0
  • Bit_score: 131
  • Evalue 4.70e-28
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 55.4
  • Coverage: 130.0
  • Bit_score: 131
  • Evalue 1.30e-28

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Taxonomy

Saccharothrix espanaensis → Saccharothrix → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 390
ATGACGCTCCTGTTCGACACGTCCGTCATCATCGGCGGCTACTCGTCCGAGGGTGTGGACACCGGCGACGCTCCGGCAGTCAGCGCCGTCACGGTCGGCGAGCTCGCCTACGGGCTCGACACCGCATCGGCCGCCGACCGTGAGCTGCGAAGCCGGCGCCTCCGCGTGGTCCTGGTGTCCTTCGAGGTCATCCCTTTCGGGGTGGAAGAGGCGAAGCTCTACGGCGTTCTGTCGGCGATGGTTCAACGCTCCGGCCGCGATCCGCGCCCGCGTCGGATGGACCTGCAGATCGCGGCGACGGCTGCTGCGGCGCGCTGCCCGGTTCTCACGGCGAACCCACGCGACTTCGAGGGCCTCGCACCACTCGTCGACGTCATCCCGATCGCCTGA
PROTEIN sequence
Length: 130
MTLLFDTSVIIGGYSSEGVDTGDAPAVSAVTVGELAYGLDTASAADRELRSRRLRVVLVSFEVIPFGVEEAKLYGVLSAMVQRSGRDPRPRRMDLQIAATAAAARCPVLTANPRDFEGLAPLVDVIPIA*