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cn_combo_scaffold_2098_13

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(16872..18116)

Top 3 Functional Annotations

Value Algorithm Source
Putative PucR family transcriptional regulator n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D075_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 90.3
  • Coverage: 373.0
  • Bit_score: 673
  • Evalue 1.80e-190
PucR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 90.3
  • Coverage: 373.0
  • Bit_score: 673
  • Evalue 5.20e-191
  • rbh
Putative PucR family transcriptional regulator {ECO:0000313|EMBL:AEA25731.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonoc similarity UNIPROT
DB: UniProtKB
  • Identity: 90.3
  • Coverage: 373.0
  • Bit_score: 673
  • Evalue 2.60e-190

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1245
GTGGTCCAACCCGGCATTCGGACTTGTCGGACCGTATCGGCGTCAGCCGTGCTCCCCTATCGTGGCGGTGTGGGTCACACCGACGTGGACGAGTCGTCGAAGCGTGCGCTCACGGCCGTCGCGGTTCGTTGCCTACCTCGCGTGGAGGACCAGTACCGCGCGTGGCTGGTACTGCTCAAGCAGTCCGGGTTGTACGGCGATTCCTGGGTCGACCACGACGAGCTCCATGCGAAGGCTCTTGAGGTGTTCGAGCTCATCTGGCGTCGCATCGCTGGGTTCGAGGTCGTCGACGACCTTGCCGAGGTGTCGCACCGGGTCGGGGTGCGGAGGGCAGAGCAGCGGGTGTCGCTCAGCGAGGTGCAGGCGGCGGCCAATCGCGACTTCCAGATCGTCTGGGAGGCCATGCTGGCGGAGGCGGACGCGCGCGAGGCCGCTGCGCTGCTGCACCAGGCCCCGGCGATCTGGGCGATCGTCGACGATCACACCCAGCGCATTACCGAGGCCTACCGTCGCCGGTCCAACGAGCTGGACGAGCTGTCCGATGACCGCCGCCGGGAGTGGTTCAGGCGCCTGCTGAAGTGTGACGGGGAGCGTGCTGACGTTGTTCAGAACGCGGCCGAGGTACTCGAGCTGCCGGTGGACGCCCGCTTCCGCGTCGCGATCGCGACCCGTGAGTTCGCCGGCCGTCTCCGCGACGCGCGGGACGCGCTGACGGCGCTGCGATGGTCGTTTCACTATCAGGAGGTCGAGGGTGGTGACCTTCTGGTCGTTCAGAGCACCCTGGAGCAGGACAAGCGTGTCATGAACTGTCTGGCCGGGATTCGGTGCGCCGTCGCGCCGCCGGCGCACGGTCTTGATGAGGTCCCCCGCGCGACCCGGATCGCGTCCGACATCCTCGCGGCGCTGCCCGAGGATCGAACCTCGCCAGGGCTGCTGGAGGACGCGTGGCTCTCGGTCGCGGCGACCCAGGCTCCGTTGGTGACACAAGCGCTGGCCGACCGACTGCAACGATGCCTGGAGAACGTCCAGGACGCCGATGTGCTGCTCGAGACTGCGCGGGTGTTCTGCGACGGGGACGGCACGGTCTCACGTGCGGCCAGCGAGCTGTACTGCCACCGGAACACCGTGCTCAACCGACTCGAACGTCTGCGGAGCCTCACCGGGGTCGACGTCCGGCGCCCTCGTGATGCGGCCGGCTTCCTGTTCGCGATGAGCGCCGGGAAGCCGGCCGCCGGACCGGCGTAG
PROTEIN sequence
Length: 415
VVQPGIRTCRTVSASAVLPYRGGVGHTDVDESSKRALTAVAVRCLPRVEDQYRAWLVLLKQSGLYGDSWVDHDELHAKALEVFELIWRRIAGFEVVDDLAEVSHRVGVRRAEQRVSLSEVQAAANRDFQIVWEAMLAEADAREAAALLHQAPAIWAIVDDHTQRITEAYRRRSNELDELSDDRRREWFRRLLKCDGERADVVQNAAEVLELPVDARFRVAIATREFAGRLRDARDALTALRWSFHYQEVEGGDLLVVQSTLEQDKRVMNCLAGIRCAVAPPAHGLDEVPRATRIASDILAALPEDRTSPGLLEDAWLSVAATQAPLVTQALADRLQRCLENVQDADVLLETARVFCDGDGTVSRAASELYCHRNTVLNRLERLRSLTGVDVRRPRDAAGFLFAMSAGKPAAGPA*