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cn_combo_scaffold_2098_17

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(21319..21960)

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, winged helix family n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X650_NAKMY similarity UNIREF
DB: UNIREF100
  • Identity: 70.1
  • Coverage: 164.0
  • Bit_score: 214
  • Evalue 9.20e-53
winged helix family two component transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 70.7
  • Coverage: 164.0
  • Bit_score: 215
  • Evalue 1.20e-53
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ACV76821.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Naka similarity UNIPROT
DB: UniProtKB
  • Identity: 70.7
  • Coverage: 164.0
  • Bit_score: 215
  • Evalue 5.80e-53

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Taxonomy

Nakamurella multipartita → Nakamurella → Nakamurellales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 642
GTGAAGGCGGCCGCGTCCGGCGAGCAGTTGACGGTGCTGCGCGACAACGATGTCGACGTGGTGCTGCTCGATCTGATGCTGCCGGGGGTGGACGGCCTGGTCGTGTGCCGGACCCTGCGTGCGCGCAGCGACCTGCCGATCATCATCGTGTCGGCGCGATCGGACTCCGGCGACATCATCGCAGGGCTCGAGGCCGGCGCGGACGACTACGTCACCAAGCCGCTCGACGCGGGTGAGCTCGCGGCGCGCATCCGGGCGTTGTCGCGGCGCCGCCGTCCCGCTACCGATGAGGCGGGCCGTCGGTTCGTGCTCGGCGACGTCGAGGTCGTACCGGACGAGGGGGTCGTCCGCAAGGCGGGGGTCGAGGTCCACCTGACCCGCACGGAGCTGCGGCTGCTCGTCGAGCTGCTGTCGGCCGACGGTCGGGTGGTCACCCGCGAGGCGCTGCTGCAGCAGGTCTGGGGCTATGACTACCTGGGCGACACCGGCTGCTCGACGTGCACATCCGACGCCTGCGCCGCAAGGTCGAGACAGACCGGACGAGCCGCGCCTGGTTCTCACCGTCCGTGGAGCCGGGTACAAGGTCGCCCGCGGATGACGGTGTGCGATGACGACGGTGCGGGGATGACGGAGCAGGGATGA
PROTEIN sequence
Length: 214
VKAAASGEQLTVLRDNDVDVVLLDLMLPGVDGLVVCRTLRARSDLPIIIVSARSDSGDIIAGLEAGADDYVTKPLDAGELAARIRALSRRRRPATDEAGRRFVLGDVEVVPDEGVVRKAGVEVHLTRTELRLLVELLSADGRVVTREALLQQVWGYDYLGDTGCSTCTSDACAARSRQTGRAAPGSHRPWSRVQGRPRMTVCDDDGAGMTEQG*