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cn_combo_scaffold_2516_17

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(16551..17204)

Top 3 Functional Annotations

Value Algorithm Source
Ectoine/hydroxyectoine ABC transporter, permease protein EhuD n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CJ80_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 91.6
  • Coverage: 215.0
  • Bit_score: 395
  • Evalue 3.00e-107
ectoine/hydroxyectoine ABC transporter permease EhuD similarity KEGG
DB: KEGG
  • Identity: 91.6
  • Coverage: 215.0
  • Bit_score: 395
  • Evalue 8.30e-108
Ectoine/hydroxyectoine ABC transporter, permease protein EhuD {ECO:0000313|EMBL:AEA23930.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" so similarity UNIPROT
DB: UniProtKB
  • Identity: 91.6
  • Coverage: 215.0
  • Bit_score: 395
  • Evalue 4.10e-107

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 654
GTGAACGTCTGGGACTGGAGCTTCGCCGGGCAGATCCTCCCGGCGCTGCTCAACGGCCTGCGCATCACCCTGATCGCGACGGTCCTCGGCTCGCTCATCGCCTTCGCCCTCGGGCTGGTCCTCGCGATCCTGGGGCGGGGGCCGCGGCCGGTGCGGATCGTCGTCCGGGCGATCGTGGAGTTCATCCGCAGCACGCCGCTGCTGGTGCAGGTCTACTTCCTGTTCTTCGTGCTGCCGACGTTCGGCATCGTCCTGCCGGCGCTCACCGTCGGTGTCCTGGCGCTCGGCCTGCACTACGCGACGTACACGTCCGAGGTCTACCGCGCCGGTATCGACGCCGTACCCCGCGGCCAGTGGGAGGCTGCCACCGCGCTCAGCCTGCCGCGCACGCGGGTGTGGACGGGAGTCGTTCTGCCGCAGGCCATTCCGCGGGTGTTGCCCGCGCTGGGCAACTACGTCATCTCGATGTTCAAGGAGACGCCGCTGCTCATCGGCATCGGTGTCTTCGACATCGTCGGGCAGGTCCGCGAGGTGGGCGGGCAGTCGTTCCGCTACGTCGAGGCCTACACCCTCGCCGGCCTGCTGTTCCTGCTGCTGAGCTACCCGGCGTCGCTGGCCGTCCGGAGATTGGAGCGCCGCCGTGCCGTCCATTGA
PROTEIN sequence
Length: 218
VNVWDWSFAGQILPALLNGLRITLIATVLGSLIAFALGLVLAILGRGPRPVRIVVRAIVEFIRSTPLLVQVYFLFFVLPTFGIVLPALTVGVLALGLHYATYTSEVYRAGIDAVPRGQWEAATALSLPRTRVWTGVVLPQAIPRVLPALGNYVISMFKETPLLIGIGVFDIVGQVREVGGQSFRYVEAYTLAGLLFLLLSYPASLAVRRLERRRAVH*