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cn_combo_scaffold_3181_10

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: 8567..9184

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, LuxR family n=2 Tax=Frankia sp. EUN1f RepID=D3D9I5_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 58.9
  • Coverage: 207.0
  • Bit_score: 217
  • Evalue 1.40e-53
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:EFC80404.1}; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.9
  • Coverage: 207.0
  • Bit_score: 217
  • Evalue 1.90e-53
LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 53.7
  • Coverage: 205.0
  • Bit_score: 192
  • Evalue 1.00e-46

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Taxonomy

Frankia sp. EUN1f → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 618
ATGGAGACGCTGCGGGTCCTGGTGGTCGACGACCATCGCGTCTTCACCGACCTGCTGACGCTCGCGCTGGGCCTTGAGCCCGACCTCGACTGCGTCGCCGTCGCCCACACCGCCGACGAGGGCCTCGCCCGCGCCGCCGCCACCGCGCCCGACGTGATGGTCGTCGACATCGGCCTGCCCGACGCGAGCGGTCTCGACGTCATCGCCGCGGTGCGCCGCGACCGGCCCGCGACCCGGGTCGTCGTGCTCACCGCGCACCCGCGCCCCGACATCGCCGACCGCGCCCTGGCCGCCGGGGCCGCCGCGTTCCTCGCCAAGGACGCACCGCTGCACCGCATCCTCGACGCCGTCCGCACCGCCGACCCGGCGCGGCCCGTCGTCGGCCCCGAGCTCGCCGGCGGCGATCGGGTGCGGCTCACCCCGCGCGAGCACGACGTCCTGCGCCAGCTCGCCCAGGGCCGCGACGCCTCCCGCGCCGCCGCGGCACTGGGCATCACCGTCGCCACCGCCCGCGGCCACATCAAGACGCTCATGGCCAAGCTGGGCGTGCACTCCCAGCTCGACGCCGTCGTGTCCGCCGATCGGCTCGGGCTGGTCACCGTCGGCACCCCGTACTGA
PROTEIN sequence
Length: 206
METLRVLVVDDHRVFTDLLTLALGLEPDLDCVAVAHTADEGLARAAATAPDVMVVDIGLPDASGLDVIAAVRRDRPATRVVVLTAHPRPDIADRALAAGAAAFLAKDAPLHRILDAVRTADPARPVVGPELAGGDRVRLTPREHDVLRQLAQGRDASRAAAALGITVATARGHIKTLMAKLGVHSQLDAVVSADRLGLVTVGTPY*