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cn_combo_scaffold_3232_18

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(15492..16829)

Top 3 Functional Annotations

Value Algorithm Source
GntR family transcriptional regulator n=1 Tax=Salinispora pacifica RepID=UPI00037C07BF similarity UNIREF
DB: UNIREF100
  • Identity: 69.8
  • Coverage: 443.0
  • Bit_score: 613
  • Evalue 1.40e-172
GntR family transcriptional regulator {ECO:0000313|EMBL:EST24237.1}; TaxID=1352936 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces roseochr similarity UNIPROT
DB: UniProtKB
  • Identity: 69.9
  • Coverage: 439.0
  • Bit_score: 612
  • Evalue 4.40e-172
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 68.6
  • Coverage: 439.0
  • Bit_score: 609
  • Evalue 9.80e-172
  • rbh

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Taxonomy

Streptomyces roseochromogenus → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1338
GTGCCGCTGCCTCGCTACAAGATCATCGTGGACGACCTCGCCGGCAGGATCAGATCCGGGGAGCTCGGCGCGGGAACCCGGCTGCCGACCCACCGTGAGCTTGCCGCACGAGAACACATCGCGGTGGTCACCGCCACCCGCGTCTACGCCGAGCTCGAGGCGGCCGGACTCGTCAGCCGCGAACAAGGCCGCGGAACCTTCGTGCGTGATCTCGCACTTCCTCAATCCCACGGCATCGATCAACAGGCCGTTGCCGACGACATCATCGACCTGAACTTCAACTACCCCGCGCTGCCTGAGCAGGCCGACTTGTTACGCCAAGCCTTGCGGGAGATCGCCAGCTCCGGCGATCTCGACGCGCTCCTGCGCTATCAGCCGCACGCCGGTCGCCCCGGCGACCGCGCCGTCATCGCCCGGCATCTCAAGCAGCGTGGGATCCCAGCTCACCCCGACCAACTCCTCGTCGTGAACGGCGCTCAACACGGCCTAACGGTCGCCCTGATGGCGACCCTCAACCCGGGTGACATCCTCGCCGTCGACGCCCTCACCTATCCGGGCATCAAGGTCCTCGCGCAGGCCCTGCGCCTCGAGCTCCTGTCCGTCCCGGCAAGCGCGCGCGGGACAGACCTTGACGCGCTTGACGCTGCCTGCGCGGCACGGCCCGTCCGAGCGATCTACACCATGCCTACCCTGCACAACCCGCTCGGCGCCGTCCTCGACGAAGCCGACCGCGGCCGACTGGCTGCTATCGCCAGCCGCCACGGCCAGATCGTCATCGAGGACGCGTCCTATGCCTACCTCGTCGACGCGCCTCCCCCACCGGTCGCTGCGCTCGCGCCGGACCTCACCATCTACGTCTCGGGGCTGTCCAAGAGCATCGCGACCGGGCTTCGTGTCGGCTTCCTCACCGCATCGGCCGCGCTCGTCCCGGCCCTCGAACGAGCGATTCGCGCCACCACCTGGAACACTCCGGCCCTCACTGTCAACATTGCCTGCCGCTGGCTTACCGACGGCACGGCCGACCACCTAGAGACACGAAAACGCGCCGATGCCACCCGTCGTCAGAGCGTCGCCCGCGAGGTCTTCCACGGCCTGCCCTACCTCAGCCACCCGAACTCGTACTTCACCTGGTTGCCGCTGCCCGATGACGCCCGGGCCGACCGCATAGCCGCCTCGTTGGCAGATCAACGGATCTCGGTGTCCACTGCCGAGCCGTTCGCCACCAGCAGCCATGTCCCGCAAGCCATCCGGGTCGCGCTGGGATCGGCGGACCTGCACAACCTCCGGACCACACTGTGCGCGGTCGCGCACGCGATCCACCTCGACGCGACGCGATGA
PROTEIN sequence
Length: 446
VPLPRYKIIVDDLAGRIRSGELGAGTRLPTHRELAAREHIAVVTATRVYAELEAAGLVSREQGRGTFVRDLALPQSHGIDQQAVADDIIDLNFNYPALPEQADLLRQALREIASSGDLDALLRYQPHAGRPGDRAVIARHLKQRGIPAHPDQLLVVNGAQHGLTVALMATLNPGDILAVDALTYPGIKVLAQALRLELLSVPASARGTDLDALDAACAARPVRAIYTMPTLHNPLGAVLDEADRGRLAAIASRHGQIVIEDASYAYLVDAPPPPVAALAPDLTIYVSGLSKSIATGLRVGFLTASAALVPALERAIRATTWNTPALTVNIACRWLTDGTADHLETRKRADATRRQSVAREVFHGLPYLSHPNSYFTWLPLPDDARADRIAASLADQRISVSTAEPFATSSHVPQAIRVALGSADLHNLRTTLCAVAHAIHLDATR*