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cn_combo_scaffold_3462_3

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: 1267..3000

Top 3 Functional Annotations

Value Algorithm Source
Integrase family protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXH6_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 50.8
  • Coverage: 577.0
  • Bit_score: 539
  • Evalue 3.40e-150
integrase protein similarity KEGG
DB: KEGG
  • Identity: 50.8
  • Coverage: 579.0
  • Bit_score: 540
  • Evalue 5.60e-151
Integrase family protein {ECO:0000313|EMBL:AEA26550.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (s similarity UNIPROT
DB: UniProtKB
  • Identity: 50.8
  • Coverage: 579.0
  • Bit_score: 540
  • Evalue 2.80e-150

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1734
GTGTCGGTCTATGCGGGCATCGACGCTGTATCCGGGCGCCGGCACTACCTCCGCGAGGTCATCCCCGCAGGGCCGAAGGCGGCGTCGGAGGCCGAGAAGGTCGCTCGGCGTCTCGCGGCGCAGGTCGATGAGCGGCGCAACCCGCGGACCGCGACAACTGTCGATCAGCTGCTCGACAAGTATCTGGAAACGCTCGACGTCGGCGTGACGACGCATCGCATGTACACGCGTTACCTGGAGAAGCACGTCCGCCCCTTCATCGGACGACTGAAGGCGGGCGCCCTCGACGCCGACGCCCTCGACTCGCTCTACGCGGAGCTCCGGCGGTGTCAGATCCACTGCACCACGCGCAAGGGCATCGATCATCGAACGCCGCGGCCTCATGACTGCGACGAGCGGTGCCGTCCTCATCAGTGCAAGCCGCTCTCGGCGTCGACGATCCGCCAGATCCACTTCGTTCTACGCGGGGCGTACGCCAAGGCGCAGCGCTGGCGTTGGGTCTCGGTCAACCCTGTCGAGTTCGCGTCACCGCCAAACGCGAAGCCTCCGGAGCCGGACCCTCCCTCCGCCGCGGACGCGGCTCGCATCATCGACGAAGCGTGGCGGGAGCCGGATTGGGGGATGCTGGTCTGGCTCACGTTGACGACCGGCGCGAGACGGGGCGAGCTGTGTGCGATCCGGTGGTCGGACATCGACCTTGACGAGGGGGTTCTCTCGTTGCGTCGCAGCATCATGCAGGACCAGACACGGACGGTCGAGAAGGACACCAAGACGCATCACCAGCGTCGCCTCACTCTCGACCCGGAGACCGTCGCGCTTCTACGGGATCACCGCCGGCGCAGGGTCGAACAGTGTGATGCGCTGGGCGTCGAGTTCGACGGTCGGTCGTTCCTCTTCTCGCTGGACCCGGCCGGGCGCACGTCCCTCGTCCCCGGCTCTGTGTCGCAGCGGTACAGCCGGATGACCGCACGGCTCGGCATCGACAGCCACCTCCACTGCCTGCGGCACTATTCGGCAACCGAGTTGATTGCGGCGGGCGTTGACGTCCGCACCGTGGCGGGCAGGCTCGGACACTCGGGCGGCGGCGTGACGACGCTGCGCGTGTATGCGGCGTGGCTCGCCGAGTCCGACCAACGCGCGTCGGCGAGTCTCGCGGCCCGCATTCCCGTCCGGCCGCCGGCGACCGATGCCCTTCCGCGGGCGATGACCGACCCTCGGACGCCGCGTGAGGTTCTCGCGGCGGAGCTACGAGGACGGGTCATGGACGGGACGATCGGTGTCGGCGACTACCTCCCGGGGATCAAGACTCTCGCGGCGGAGCGGGACTTGTCAGTCAGCACCGTTCATCGTGCCTTCGAATTGCTGCGTGAGTGGGGAGTCATCGCCGGCGGGCCGGGCGAGCGACCGAAGGTCTGCGCGATCGAGTCGCCGGAGCCGAAGGCTGCCGAGTCGCCAGGTGCGCCGGAAGTGAGGGTTCTTGAGCCGGTCGACGATGTCGATCCGGACGAAGGCGAGTTCGTGGAGTTGATCGTGCGACGGGGTGGCGCAGTCGTGGCGCGACTCTCGACTTTCGCGGACCCGCGTGACGGGGGCGAGCTCCGTGAGCTGCTCCTGGGTGTCATTGAACGTGGAGGCGGTGTCGAGCAAGACCTTGCCCAGTACGAGATGGATGTTCGCGGCGCGAGCGGAGAGCTGCTGCTGACCTTCGTTGCTGCTCGACGGCGGCGTCGCTGA
PROTEIN sequence
Length: 578
VSVYAGIDAVSGRRHYLREVIPAGPKAASEAEKVARRLAAQVDERRNPRTATTVDQLLDKYLETLDVGVTTHRMYTRYLEKHVRPFIGRLKAGALDADALDSLYAELRRCQIHCTTRKGIDHRTPRPHDCDERCRPHQCKPLSASTIRQIHFVLRGAYAKAQRWRWVSVNPVEFASPPNAKPPEPDPPSAADAARIIDEAWREPDWGMLVWLTLTTGARRGELCAIRWSDIDLDEGVLSLRRSIMQDQTRTVEKDTKTHHQRRLTLDPETVALLRDHRRRRVEQCDALGVEFDGRSFLFSLDPAGRTSLVPGSVSQRYSRMTARLGIDSHLHCLRHYSATELIAAGVDVRTVAGRLGHSGGGVTTLRVYAAWLAESDQRASASLAARIPVRPPATDALPRAMTDPRTPREVLAAELRGRVMDGTIGVGDYLPGIKTLAAERDLSVSTVHRAFELLREWGVIAGGPGERPKVCAIESPEPKAAESPGAPEVRVLEPVDDVDPDEGEFVELIVRRGGAVVARLSTFADPRDGGELRELLLGVIERGGGVEQDLAQYEMDVRGASGELLLTFVAARRRRR*