ggKbase home page

cn_combo_scaffold_3462_6

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(4082..4825)

Top 3 Functional Annotations

Value Algorithm Source
XRE family transcriptional regulator n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEF5C similarity UNIREF
DB: UNIREF100
  • Identity: 71.7
  • Coverage: 247.0
  • Bit_score: 366
  • Evalue 1.70e-98
XRE family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 60.3
  • Coverage: 247.0
  • Bit_score: 320
  • Evalue 3.90e-85
  • rbh
XRE family transcriptional regulator {ECO:0000313|EMBL:AEK46599.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis medite similarity UNIPROT
DB: UniProtKB
  • Identity: 60.3
  • Coverage: 247.0
  • Bit_score: 320
  • Evalue 1.90e-84

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Amycolatopsis mediterranei → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 744
GTGGCCAACGAGAGGCTTCGCGACGCGCTGCTCGAAGCCGGCGTGTCCGTCGAGGACGCGGCTACAGCGACAGGCACAGACCCCAAGACGGTCGAGCGTTGGGTGACGACCGACCGGACGCCGTACGCCCGACACCGCCGCAGCCTCGCGAAGCTGCTCCGCCAGGCCGAGAGCTACCTGTGGCCGGCCGCGGTGTCGCCCGAGCGTCAGGCGTCCATCGCGGCGTCGGAGATCGTCGGCGTCTTTCCCCATCGGAACGCGCTGCCCAACGAGCTGTGGGATCGCCTCCTGACCTCCGCGGCGGACCGCATCGACATCCTCGTCTACTCCGGGCTGTTCCTCGTCGAACGACCGGACTTCATCCGCACGCTCGCCGACAAGGCCGCTGCCGGCGTCACCGTCCGCATCGCGTTCGGGGACCCCGACTCCGCCGCTGTCGAACTGCGAGGCGACGAAGAGGGCCTCGGAGAAGGCGCGCTGGGTGCACGAATCAAGTACGGACTCATGCCCTACTCACCGCTGCAGGGCACACCCGGGATCGAGTTCCGCTTCCACGCCACGACGCTCTACAACTCGATCTTCCGATTCGACGACGAGCTCATCGTCAACAACCACGTCTATGGAGCCCCAGGCGCCCACGCCCCAGCCCTCCACCTGCGCAAGCTCGGTGTGGGCGACCTCTTCTCCATCTACACGAAGAGCTTCGTCGACGTCTGGACGCTGTCAAAACCCGCCTCGTGGTGA
PROTEIN sequence
Length: 248
VANERLRDALLEAGVSVEDAATATGTDPKTVERWVTTDRTPYARHRRSLAKLLRQAESYLWPAAVSPERQASIAASEIVGVFPHRNALPNELWDRLLTSAADRIDILVYSGLFLVERPDFIRTLADKAAAGVTVRIAFGDPDSAAVELRGDEEGLGEGALGARIKYGLMPYSPLQGTPGIEFRFHATTLYNSIFRFDDELIVNNHVYGAPGAHAPALHLRKLGVGDLFSIYTKSFVDVWTLSKPASW*