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cn_combo_scaffold_3462_9

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: 5485..6120

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Actinomadura atramentaria RepID=UPI00036CBD0A similarity UNIREF
DB: UNIREF100
  • Identity: 51.2
  • Coverage: 82.0
  • Bit_score: 79
  • Evalue 6.00e-12
transcription factor WhiB similarity KEGG
DB: KEGG
  • Identity: 46.3
  • Coverage: 82.0
  • Bit_score: 76
  • Evalue 1.10e-11
Transcriptional regulator WhiB {ECO:0000256|HAMAP-Rule:MF_01479}; TaxID=471852 species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora c similarity UNIPROT
DB: UniProtKB
  • Identity: 46.3
  • Coverage: 82.0
  • Bit_score: 76
  • Evalue 5.40e-11

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Taxonomy

Thermomonospora curvata → Thermomonospora → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 636
ATGACCGCCGCGCGCAACGAGGTCCGGAACTGGCGCGCGGACGCGCTGTGTGTCCAGGTCGACCCGGACCTGTTCTTTCCCGAGACCGACCGTGGCACCGCCTTCGACCGGCAGGTCACCGCGGCCAAACGGGTCTGCGCGGGCTGCCCGGTCCGCACCCAGTGCCTGGACTACGCCCTGCGGGTGCTGCCGGAGGGGATCGCGGGCGGCACGACCCCGGCCGAACGGAACGCGCTACGCCGCCAGCGCGGCCTCGAGCTGGTCGACACCCGGCTCGGGCTGCTCCCGCCGGACGGGCAGCGGGAGCGGGCCGCGGCCGGCCGGCGCGCGGCCGCGGCGGGGATGAGGCGTCGGAGTGAGCCCGGAGGCAATGGCGCTGATCTCCTCGCGTCGCCGCGCGGTCACAACCAAGGCGGCCGAGCTGATCGAGGCGTTCGAGACCCAGTTCGGCCGCACCCCCAACGGGCTCGAACGCGACCGCCTCTCGCGCCAAGCGACCTTCGCGACCCGCCGCTCAAAGTCCCACGACGGCCAGACCCGCGAACAGCTCCTCGCCCGGGTCGATACGCATTTGCGGGCCGAGGTGGCCGGCGGGCTCGCCGGGGTGGCGCAGTCCGCGCTGGCCGCACGGAATGA
PROTEIN sequence
Length: 212
MTAARNEVRNWRADALCVQVDPDLFFPETDRGTAFDRQVTAAKRVCAGCPVRTQCLDYALRVLPEGIAGGTTPAERNALRRQRGLELVDTRLGLLPPDGQRERAAAGRRAAAAGMRRRSEPGGNGADLLASPRGHNQGGRADRGVRDPVRPHPQRARTRPPLAPSDLRDPPLKVPRRPDPRTAPRPGRYAFAGRGGRRARRGGAVRAGRTE*