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cn_combo_scaffold_3996_18

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: 19415..20857

Top 3 Functional Annotations

Value Algorithm Source
Extracellular ligand-binding receptor n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D217_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 59.4
  • Coverage: 483.0
  • Bit_score: 549
  • Evalue 2.70e-153
ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 59.0
  • Coverage: 481.0
  • Bit_score: 549
  • Evalue 1.00e-153
Extracellular ligand-binding receptor {ECO:0000313|EMBL:AEA28077.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dio similarity UNIPROT
DB: UniProtKB
  • Identity: 59.0
  • Coverage: 481.0
  • Bit_score: 549
  • Evalue 5.00e-153

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1443
GTGGACTCGACCGCCACGCTGAGCGCCGAGTCCGTCGTCGACCTCCCGGTCGCCGACACCTTCGGCCTGTTCGGGAGCGGCCGCGCCGAGGCCTGGCTGTTCGACGCGCGCTGCGAACGCGTCGCGGCGGGCAACGTCGTCAGCATGCGGCTGCCCATCGACGGCGACGACCGCCGGTCCGGGCGCCACGGCGTCGAACTGCTCGGGCGCATCTCCGCGGTCCGCCCCAACTCGCGGATCGTCGTCGAGCACGACCAGCCGTGGCGCGGCCGGATCCGGCTCGCCTTCGACGCCGACGGCGCCCACCGCACCCGCGTCCGCGTGCGTGCCGACGTCACCGCGTCCGGCATCGACTGGCTCATCCGCCGCGGCGGCGTCGCCCTGCCCGACCCCGCACCCACCGACGCCCTGCGGATCGGGCTGCTCACCACCAAGTCCGGGCCCGGCGCGGTGTACGCGTCGGCGACGCAGTACCTCGCCGAGCTGGCCGTGGCCGAGGTCGAGGCGCTCGGCGGTGTCGGCGGCAGGCGCCTGGAACTGCTCGTCGCCGACGACGCCACGGACCCCGCGCTCGCCGCCGCCGAGGGCGCCCGGCTGGTCCGGGCCGGCTGCCGCGCGATCTTCGCCTGCACCACCTCCAGCAGCTTCGACGCGCTGCGTCACGCCGTCCGCGGCGACGACGTGCTGCTCGTGCACTCGGTCATCAACGAGGGCGGCGCCGTCCACTCGGCATCGGTCGTCCGCTTCGGAGAACGTCCCGGCGCCCAGGTCGCCGCGCTCGCCCGCCCGCTCATGCGCGCCGCCGGCGGGCGCCGCTGGTTCCTCGTCGGGCAGCGCTACAGCTGGTCGTTCGGCGCGCACCACGCTGCACGCCGCGTCCTCGGCGGGGCGGGCGGCAGCGTCGTCGGCGAGGAGTGCGTCCCGTTGGGCACCACCGACTTCGCCGGCGTCGTCGACCGCGTCGCCGCGTCCGGCGCCGACATCGTCATGTCCTCGCTCGTAGGTGCCGACGAGGTCGCGTTCCAGCGCCAGTGCGCCGCCGCCGGGCTCCGGTCGTCGACGAAGGCGCTCTCGCTGGTGATGGACGAGTCGACGTGGGAGCACGTCGGCGCCACCGCGGCCGAGGGCGTCGTCACCGCGCTCGGCTACTTCCAGGACGACCCCGCCGCCGGCAACGCCGACCTGCTCCGCCGCTACCGCGACCGCTTCGGTCCCTGGGCGCCACCGATCTCGTCGTTGTCCGAGACGGTCTACGAGGCCGTGCTGCGCTACGCCCGCGCGGTCCGCCACGACCCCGATGCCGATGCGGCACAACAGGGCCGGGCGCTGGTGCGACCCGACGGCTCGGGTTCCGCGATCGGGGAGCGCGACCTGCTCGGCCGCCATCTGTATCTCGCCGAGGCCGGGCCCGATGGGCTGCGCGTCGTCGACGAGGCGGGCTGA
PROTEIN sequence
Length: 481
VDSTATLSAESVVDLPVADTFGLFGSGRAEAWLFDARCERVAAGNVVSMRLPIDGDDRRSGRHGVELLGRISAVRPNSRIVVEHDQPWRGRIRLAFDADGAHRTRVRVRADVTASGIDWLIRRGGVALPDPAPTDALRIGLLTTKSGPGAVYASATQYLAELAVAEVEALGGVGGRRLELLVADDATDPALAAAEGARLVRAGCRAIFACTTSSSFDALRHAVRGDDVLLVHSVINEGGAVHSASVVRFGERPGAQVAALARPLMRAAGGRRWFLVGQRYSWSFGAHHAARRVLGGAGGSVVGEECVPLGTTDFAGVVDRVAASGADIVMSSLVGADEVAFQRQCAAAGLRSSTKALSLVMDESTWEHVGATAAEGVVTALGYFQDDPAAGNADLLRRYRDRFGPWAPPISSLSETVYEAVLRYARAVRHDPDADAAQQGRALVRPDGSGSAIGERDLLGRHLYLAEAGPDGLRVVDEAG*