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cn_combo_scaffold_5211_15

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(12002..12814)

Top 3 Functional Annotations

Value Algorithm Source
fadB; long-chain-fatty-acid-CoA ligase (EC:6.2.1.3) similarity KEGG
DB: KEGG
  • Identity: 76.4
  • Coverage: 267.0
  • Bit_score: 433
  • Evalue 5.90e-119
Linear gramicidin synthase subunit C n=1 Tax=Rhodococcus sp. AW25M09 RepID=L8DJQ6_9NOCA similarity UNIREF
DB: UNIREF100
  • Identity: 77.0
  • Coverage: 270.0
  • Bit_score: 448
  • Evalue 4.80e-123
Linear gramicidin synthase subunit C {ECO:0000313|EMBL:CCQ14881.1}; TaxID=1268303 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. AW25M09.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.0
  • Coverage: 270.0
  • Bit_score: 448
  • Evalue 6.70e-123

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Taxonomy

Rhodococcus sp. AW25M09 → Rhodococcus → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 813
TTCCTCGGGATCACGACGATGCTCAACTGGATGATGGCCGTCCCCGGCTTCTCGTCCTACGACATCTCGTCGCTGCGCAACATCCAGTACGGCGGCGGACCGATGCCGTCGTCGGTGGTGAAGGCGGCGCTCGACAACTTCCCCTGCACCCTCATCCAGGGCTACGGCCAGACCGAGGGCACGACCATGTGCTTCCTCTCCCAGGAGGACCACCTCGACGCGGTCCGTGGCGTGCACGCCGAGCGGCTGATGTCGTGCGGGCGCGAGGGTTTCGTCACCGAGGTGCGGGTCGTCGACGCGTGCGGCAACGAGGTCCCGAAGGACGGTCGGACCGCCGGCGAGATCGTCATCCGGTCCGAGGCGAACATGCTCGGCTACCTCAACCGGCCCGACCTGACCGCGAACACCTTGCGCAACGGCTGGATGTGGACGGGTGACGTCGCGACCTGGGACGCCGAGTCCTACGTGTTCATCGTCGACCGCGCCAAGGACATGATCATCTCCGGTGGCGAGAACATCTACTCGATCCAGGTCGAGGAGGCCGTCAACCAGCACCCCGCGGTCCTGGAGTGCGCGGTGATCGGCGTCCCCGACGACGAGTGGGGCGAGTCGGTCAAGGCGTTCGTCGTGCTCAAGCCCGAGACGGCCGCGACCGAGGCCGAGATCATCGACACCGCCCGCAGCCACCTGGCCTCCTACCAGAAGCCGAAGTCGGTGGAGTTCGTCGACGCCCTGCCCAAGGCGCCCACCGGGAAGATCCTCAAACGCGAGCTGCGCCGGCCGTTCTGGGCCGAGCGGGACCGGTCGGTCTGA
PROTEIN sequence
Length: 271
FLGITTMLNWMMAVPGFSSYDISSLRNIQYGGGPMPSSVVKAALDNFPCTLIQGYGQTEGTTMCFLSQEDHLDAVRGVHAERLMSCGREGFVTEVRVVDACGNEVPKDGRTAGEIVIRSEANMLGYLNRPDLTANTLRNGWMWTGDVATWDAESYVFIVDRAKDMIISGGENIYSIQVEEAVNQHPAVLECAVIGVPDDEWGESVKAFVVLKPETAATEAEIIDTARSHLASYQKPKSVEFVDALPKAPTGKILKRELRRPFWAERDRSV*