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cn_combo_scaffold_5328_15

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: 10529..11017

Top 3 Functional Annotations

Value Algorithm Source
Regulatory protein MarR n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CM01_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 71.6
  • Coverage: 162.0
  • Bit_score: 232
  • Evalue 3.20e-58
regulatory protein MarR similarity KEGG
DB: KEGG
  • Identity: 71.6
  • Coverage: 162.0
  • Bit_score: 232
  • Evalue 9.10e-59
Regulatory protein MarR {ECO:0000313|EMBL:AEA22488.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st similarity UNIPROT
DB: UniProtKB
  • Identity: 71.6
  • Coverage: 162.0
  • Bit_score: 232
  • Evalue 4.50e-58

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 489
ATGTCGGATGGCGGGGCCACTCAGTGGCTCGACGACGACGAGATGCGGTTCTGGCGGTCCTTCATCATCACGGCCACTCTGCTCGAGTCGCGTCTGAACCAGAACCTCAGCGAGTCGCACGGCATCACTCACAGCGACTACACGATCCTCGTCTTCCTCTCCGAGGCCCCGGGCCGGCGGCTGCGCATGAGCGTGCTGGCCGAGCTGATCGCCTCCTCGAAGTCGCGGCTCTCGCACCAGATCGCGCGGATGGAGAAGGCGGGCCTCGTCTCGCGCCAGGAGTGCGACTCCGACGGCCGCGGCGTCCTCGCCGCCCTCCTCCCCGCGGGCATGGACCTGCTGGAGCGGGCCGCCCCGACCCACGTCACCGCCGTCCGCGAGCTCGTGATCTCGCAGGTCACCACGGCGGAGCAGAAGTCCTTCGCCGACGCGCTCGACCGGATCCACCGTGCCCTGAGCGGCGACGGCCAGGTCGCGGCCGCCAGCTAG
PROTEIN sequence
Length: 163
MSDGGATQWLDDDEMRFWRSFIITATLLESRLNQNLSESHGITHSDYTILVFLSEAPGRRLRMSVLAELIASSKSRLSHQIARMEKAGLVSRQECDSDGRGVLAALLPAGMDLLERAAPTHVTAVRELVISQVTTAEQKSFADALDRIHRALSGDGQVAAAS*