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cn_combo_scaffold_5414_3

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: 2769..3413

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Sciscionella marina RepID=UPI00037F8C03 similarity UNIREF
DB: UNIREF100
  • Identity: 46.6
  • Coverage: 204.0
  • Bit_score: 158
  • Evalue 7.80e-36
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 40.8
  • Coverage: 201.0
  • Bit_score: 139
  • Evalue 1.40e-30
Putative transcriptional regulator {ECO:0000313|EMBL:GAD35370.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.; similarity UNIPROT
DB: UniProtKB
  • Identity: 41.0
  • Coverage: 195.0
  • Bit_score: 139
  • Evalue 5.30e-30

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Taxonomy

Microbacterium sp. TS-1 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 645
ATGGACAGTGACGAACGGCAGCTCAGCCTGCGCGAGCGCCGTCGTCGCCAGACCGAGGACGAGATCGGCGTCGCCGCCCTGGACCTCTTCGAACGCCAGGGCGTCGCCGCGACGACGGCCGAGGACATCGCGCGCGCGGCCGGTATCTCCCCGCGCACCTTCTTCCGGTTCTGCGCCACCAAGGAGCAGGCCGTGATGCTGGGCGACGGTGAGCTGGAGGTGGACCTGCTCGCGGAGCTCGGCGCGCTGCGCGCCGGTGACGACGCCTACGCCGCGCTCGAGGCCTACTGGCAGGACGCGTTGACGCGGCTGGGCACCGATCCGACCTCGGGCGACCGGTTCCTCCGCGTCCGCCGGCTGGCTCTCCACGAACCGACGGTGCTGGCCACCAGCCTGCGGCTCGACGCCGAGCGGACCGACCTGCGGGTGTCGACGCTCGTCGCGAGCACGGGGGTGACGCCTTTGCGGGCCCGCGCGGTCGTCGACGCCTTCTCGACGCTCGTCCGGCTGACCCTGGAGGAGTGGGTGCGCTCGGTCGAGGCCGGCGACCCCGCCGATCCGCTGGAGGTCTACGCGCAGTGCCGCGTCGCGTTCCGCGAGGCGGTCGCAGGCCGCTCTCGTCACTCACAGGGGGCGAGGGCGTGA
PROTEIN sequence
Length: 215
MDSDERQLSLRERRRRQTEDEIGVAALDLFERQGVAATTAEDIARAAGISPRTFFRFCATKEQAVMLGDGELEVDLLAELGALRAGDDAYAALEAYWQDALTRLGTDPTSGDRFLRVRRLALHEPTVLATSLRLDAERTDLRVSTLVASTGVTPLRARAVVDAFSTLVRLTLEEWVRSVEAGDPADPLEVYAQCRVAFREAVAGRSRHSQGARA*