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cn_combo_scaffold_6069_9

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: 7501..8034

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE3AA similarity UNIREF
DB: UNIREF100
  • Identity: 65.9
  • Coverage: 173.0
  • Bit_score: 223
  • Evalue 1.60e-55
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 51.7
  • Coverage: 176.0
  • Bit_score: 183
  • Evalue 5.30e-44
Transcriptional regulator, TetR family {ECO:0000313|EMBL:AIY16669.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex ( similarity UNIPROT
DB: UniProtKB
  • Identity: 51.7
  • Coverage: 176.0
  • Bit_score: 183
  • Evalue 2.60e-43

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Taxonomy

Pimelobacter simplex → Pimelobacter → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 534
GTGGCCGTCGGAGACCGCGGGTTCCACGGCACCAGCCTCAAGCACATCGCCCAGGGCTCCGGGCTGAGCACGGCCGCGCTGTACGTCCACTTCGGCTCCAAGGAGGAGCTGCTGTTCGCGCTGTCGCGGCGCGGCCACGCGATGGCTCTCGACGTGGTCCGGGCGGCCGCCGCCGCGGAACCCGACCCGCGACCGGCAGCGATCCTGCTGGTCAGGGCGTTCACCGAATGGCACGCCGAGTACCGCACCATCGCCCGCATCGTGCAGTACGAGCTCGCCGCGCTCACGCCGGAGCACCGGGCCGAGGTCGCCGACCTGCGGCGCGGGATCGAGCGCGTCGTCCAGGAACTGATCGAGCGCGGCGTCGAGGCGGGGGTGTTCACCGTCCCCGACCTGCGGGGCGCGGCCACCGCCGTGCTCTCGCTGGGTGTCGACGTGGCCCGCTGGTACGCCCCGGGGCTCCGCTGGAACCCGGGTGAGCTGGGCGTCCTCTACAGCGACCTCGTCGACCGGATGCTGTCCGCCGGGACATGA
PROTEIN sequence
Length: 178
VAVGDRGFHGTSLKHIAQGSGLSTAALYVHFGSKEELLFALSRRGHAMALDVVRAAAAAEPDPRPAAILLVRAFTEWHAEYRTIARIVQYELAALTPEHRAEVADLRRGIERVVQELIERGVEAGVFTVPDLRGAATAVLSLGVDVARWYAPGLRWNPGELGVLYSDLVDRMLSAGT*