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cn_combo_scaffold_6061_8

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(7076..12028)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI00036B1297 similarity UNIREF
DB: UNIREF100
  • Identity: 60.8
  • Coverage: 786.0
  • Bit_score: 873
  • Evalue 4.80e-250
comE; DNA internalization-related competence protein ComEC/Rec2 similarity KEGG
DB: KEGG
  • Identity: 55.1
  • Coverage: 779.0
  • Bit_score: 798
  • Evalue 3.20e-228
DNA internalization-related competence protein ComEC/Rec2 {ECO:0000313|EMBL:AIJ21881.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source similarity UNIPROT
DB: UniProtKB
  • Identity: 55.1
  • Coverage: 779.0
  • Bit_score: 798
  • Evalue 1.60e-227

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Taxonomy

Amycolatopsis methanolica → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 4953
ATGACGTCCGCGGTGCGCGACCAGGCCGAGGAGGACACCGCCGTCCCGCCCGACCTGCGGCTCGTCCCTGCCGCGCTCGCGGTCTGGGCCGTGACGCTCACCGGCCTGCTGGGCGGACTGCCCGGCGTGCTCGTCGCGGCCGGCCTGCTGCTCGTCGCCGGGATCGTGCTCGCTCGCCGGGCCCGCGGTCGTACCTGGGCGGCCGGTGCCGCGGCCGCGCTCGGGTGCGCCGTGGCGGCCGCGGTCGTCGTCGGCACCAACGTCGCGATCGTCGCCGGGCACCCGCTGGCCGCTGCGGCGTCGACCGGGGCGTCCGCCACGCTCCGGGTCACGCTCACCGACGACCCGCGCCCCGTCCGCCCGGCCACGGGCGTGCCGATCGCGACCGGCGGCCAGGTCACGATCGCCGCCGACCTCGTCGAGGCCGCCGCCGGCGCCGGTCGCTGGACCACCGGTGGCCGGGTGCTGCTGATCGCGCCGTCCGACGGTTGGTCCGGACTGCTCCCGGGCCAGTCGGCACGGGCCGAGGGTCTGCTCGCCCCGCCCACCCGCAGCGACCTCACCGTCGCCGTCCTGCGGGTCCGCGGCGCTCCCGCCGAGGTCACGGCGCCGCCGTGGTGGCAGAGCGCCGCCGGGACGCTGCGCGACGGCCTGCGCGCGGCGTCCGGGGTGCTGCCGGAACGGTCGGCGGGGCTGTTGCCCGGGCTGACCGTCGGCGACACCCGCGACCAGACCCCGGAGGTCGCCGACGACTTCCGTGCCGCGGGCCTGACACATCTCACGGCGGTGTCCGGGGCGAATCTCGCGGTCGTCGCCGGTGCGGTGCTGCTCCTGCTGCGGCTGCTGCGCGCCGGGCCACGGGTGTGCGCGGTCGGCGCCGGACTGGCGCTGATCGGGTTCGTCGTGCTGGCGCGGCCGTCGCCGAGCGTGCTGCGCGCCGCTGTCATGGGCGGCGTCGTGCTGCTCGCGCTGGCCATGGGTCGCAAGCGGTCCGCGGTTCCGGCGCTCGCGGCGACCGTCGTCCTCCTGATGCTGTGGGTGCCGCGGCTGGCGGTCGACCCGGGGTTCGCGCTGTCGGCCGCCGCCACGGCGGCTCTGGTGCTGGTCGCCCCGGGATGGGCGCGGCGGCTTCGCGACCGCGGGGTCCCGCCCGGCGTCGCGGAGGCACTCGTCATCCCCGCGGCCGCCGGGATCGCGACGGCGCCGTTGATCGCGGGCCTGAGCGGCACCGTCAGCCTGGTCTCGCTGCTGGCCAACCTGCTCGCCGCGCCCGTCGTCGCGCCGGCGACGGTGCTCGGGGTTCTGGCCGCGCTGCTGTCGGTGGTGAGCCCGACCGCGGCCGAGGTGTGTGCGTGGCTCGCGGGACCGGAGGTCGGCTGGCTGGTGCTGGTCGCCGACCGGGCCGCGGCGATCCAGGGCGGCGTCGTGCCCTGGCCGTCGGGATGGGTCGGCGCGTTGCTGCTGGTCGCCGTGATCGTGGTGCTCGCCGTGGTGGTGAGGTCACGGCGGCTGCGGGCGCTCCTGGCCGCCGTGCTGGTGGGGCTGCTGCTCGTCCTGGTGCCGACGCGCGTCGTCACACCTGGCTGGCCGCCCACCGGGTGGGCGGTCGTCGCGTGCGACGTCGGGCAGGGCGACGCGCTCGTGCTCGCCACCGGCGCACCCGGGCACGCGGTGCTCGTCGACGCCGGCCCCGACGATGGTCCGGTCGACGCCTGCCTCGCCCGGCTGGGCGTGCACTCGCTCGACCTCGTCGTGGTCAGCCACCTGCACGCCGACCACGTCGGCGGGATGTCGGGCGCGCTGCGGGGCAGGGCTGTCGGCGGGATCGCGGTCGGCCCGTCGCGCCAGCCCGGCGCGGCCCTGCGCCGCCTCGGCGTGCAGGCCCGGGAGGCGGGCACGACCGTCGTGGCGCTCGGGGCAGGGCAACGGCTGACCTGGCCCGGTCTGGTGCTCGACGTGCTCGGCCCCGTGCACCCGGCCCTCGACGTCGATCCCGGGGACGGGACAGCCGTCAACGACGGCTCGCTCGTGGTGCGCGCCCAGACACCGGCGGGGTCGGTGCTGCTGACCGGGGACGTCGAGATCGCGGCGCAGGCCGACCTGCTCACGGCCGGCGTGCCGCTGCGCGCCGACGTCCTGAAGATGCCCCACCACGGCTCGAGATACAGCCTGCGCGAGTTCCTCGCCGCGGTGGCGCCGCGGGTCGTGCTGGTCTCGGTCGGGGCCGGCAACAGCTACCGGCACCCCGACCCGCAGCTGCTCGGGGTCCTCGGCTCGGCCGGGGTCGCGGTGCGCCGCACCGACCACGACGGCGACACCGCGGTCGTCGCCGGTGCGTCGACCGACCAGGGCGGACCGTCGGTGGTGTCGCGCGGTGATCCGCTCCCGGGCCGCCGCCGACGTGCTCGGCCCGGGCGGCGACGACCCTGCTCAGTCGCGGCCGGCGAGCGCCTCGCGCACGGCCTTGCTGGTCGCCGCGACCGTCGCGCTCGGGGCGACGCGGTCGGCGACGGCGTCGAGGGTCTTCAGGCCGTCACCGGTGATGAGCAGGACGGTCTCGGCGTCGGGGTCGATCTGGCCGGCCTCGATCAGCTTCTTCGCGGTCGCGACGGTGACGCCACCGGCGGTCTCGGCGAAGACACCCTCGGTGCGGGCCAGCAGCTGGATGGCGTCGCGCACCTCGTCGTCGGAGACGTGGCCGATCGCGCCCCCGGTGCGGCGCACCGAGTCCAGCACGTACGGGCCGTCGGCCGGGTTGCCGATCGCCAGCGAGCGGGCGATCGTGTCCGGCTTGACGGGGCGGATGACGTCGTGGCCCTCGGCGAACGCCGTCGCGACCGGCGAGCAGCCGGTGGCCTGCGCGCCGAACATCTTGTACGGGGTCGGCTCGACGAGCCCGAGCTTGCCGAACTCCTGGAAACCCTTGTCGATCTTGGTCAGCTGCGAGCCGGACGCGATCGGGACGACGATCTGCTCGGGCAGGCGCCAGCCGAGCTGCTCGGCGACCTCGTAGCCCAGCGTCTTCGAACCCTCGGCGTAGTACGGGCGGACGTTGACGTTGACGAACGCCCACTCCTCGTGCTCCGCCGCGAGCTCGGTGGCGAGCCGGTTGACGTCGTCGTAGTTGCCGTCGACGGCCAGCAGCGTGCCGCCGTAGACGGCGGTGGTGAGGACCTTGGCCTTCTCCAGCGACGACGGGATCAGCACGACCGAGTCCCACCCGGCGCGCGACGCCGCGGCGGCGACGGCGTTGGCGAGGTTGCCCGTCGAGGGGCAGCACAGCACGGTGAAGCCCAGCTCGCGGGCGGCGGCGAGGGCGACGGCGACGACGCGGTCCTTGAAGGAGTGCGTCGGGTTGCCGGTGTCGTCCTTGACCCACAGGGAGCGCACGCCCAGCTCGGCGGCGAGCCGGTCGGCCTTGATCAGCCGCGTCATGCCCGGCTCGGTGTTGGGGTGCGACTGCACGTTCGACGGCACGGGCAGCAGGTCGCGGTAGCGCCAGATCGACTGCGGGCCGGCCTCGATCGACTCACGCGTGACGGCGGGGAAGTCGTAGGCCACCTCGAGCGGGCCGAAACACTGCGGACACGCGAACTCCGCCGCCAGGGGTGTCTCGTGGCCGCACTCGCGGCAGGAGAGGGCACGGGCCGAACCGAGGTCGAGGCCGGTGGAGCGCGCCGGCGCAACAGAAGTCATCGGAGAATCTCCTCATCTTCCCCGCACGAAGCGGGTCGGAATTGGCACCGTGATCGTCACACGCGATGGTCGTGCGACGCCGGTTGCCGGGGTGTCAACGGGCCGTTCCCTCTACCCCTCTGGATGAGCCATATTCGATTGTGCGAGCCGGGCAGCACCGTGATGCGCTCCGTTCTCCCGTCAACCGTACGACATGTCCTGCGCCGACGCGAAGTCGCGGTCCGGGATCTGGGAGGCGGGTCACGTCCGCGGCCGGTGCTGGGCCACGATGAAGGGGTGACCCCACCGGCAGCCGACGCGACGCCTCCACACCCCGTCCACCTCGTCGTGGGCGAGGAGGAGCTGCTCGCCGAGCGGGCCGTGCAGGACATCGTGACCAGGTCGCGGGCGGTCGACCCGGACACCGACGTGCGCCGGGTGCGCATCGGCGAGCTCGCTCCCGAGGACCTGGCCGAACACCTCAGCCCGTCGCTGTTCGCGGAGGGGCGGGTCGTCGTGCTCACGTCGGCGCAGGAGGTGGCCAAGGACATGGCCACGGCCGTGCTGCGCTACGCCGCCGAACCCGCCGACGGGATCGTCCTGGTCCTCGTCCACCACGGCGGAGCCCGGGGCAAGTCGTTCGCCGACGACCTGCGCAAGGCGGGTGCCGAGGTGATCCGCTGCGACCGGCTGACCCGCCCGGCCGAGCGGGCCGACTTCGTCCGCGCCGAGGTGCGCCGCCTCGGCGGCAAGATCACCGGCGACGCCCTCGAGGTGCTGATGGAAGCCGTCGGGTCGGACCTGCGCGAGCTCGCCTCGGCGGCGGGGCAGCTCGTCGCCGACACCGGCGGCGCGATCGACGAGAAGTCGGTGCGCCGCTACCACCGCGGCAAGGCCGAGTCGTCGGGGTTCACCGTGGCCGACAAGGTCGTCGCGGGCGACCGGGAGGGTGCGCTCGAGGCGTTGCGCTGGGCGCTCGTCCTGGGTGTGGCGCCTGTCCTGGTCGCCGACGCGCTGGCCGACGCGGTGCGGACGCTCGCGAAGGTCGGCTCGGCCGGCCGGGGCGACCCCAACCGGCTCGCGAGCTCGCTGGGCATGCCGCCGTGGAAGATCCGCAAGGCGCAGGGTCAGGTCCGCTCGTGGCGGCCGGAGGGGATCGCGGTGGCGTTCGCAGCGGCCGCGGAGGCGAACGCCGACGTCAAGGGCGCGGCCGCCGATCCGGAGTTCGCGCTGGAGCGCGCGGTGCGTCGCATCATCGACGCCCGCGACATGCGCTGA
PROTEIN sequence
Length: 1651
MTSAVRDQAEEDTAVPPDLRLVPAALAVWAVTLTGLLGGLPGVLVAAGLLLVAGIVLARRARGRTWAAGAAAALGCAVAAAVVVGTNVAIVAGHPLAAAASTGASATLRVTLTDDPRPVRPATGVPIATGGQVTIAADLVEAAAGAGRWTTGGRVLLIAPSDGWSGLLPGQSARAEGLLAPPTRSDLTVAVLRVRGAPAEVTAPPWWQSAAGTLRDGLRAASGVLPERSAGLLPGLTVGDTRDQTPEVADDFRAAGLTHLTAVSGANLAVVAGAVLLLLRLLRAGPRVCAVGAGLALIGFVVLARPSPSVLRAAVMGGVVLLALAMGRKRSAVPALAATVVLLMLWVPRLAVDPGFALSAAATAALVLVAPGWARRLRDRGVPPGVAEALVIPAAAGIATAPLIAGLSGTVSLVSLLANLLAAPVVAPATVLGVLAALLSVVSPTAAEVCAWLAGPEVGWLVLVADRAAAIQGGVVPWPSGWVGALLLVAVIVVLAVVVRSRRLRALLAAVLVGLLLVLVPTRVVTPGWPPTGWAVVACDVGQGDALVLATGAPGHAVLVDAGPDDGPVDACLARLGVHSLDLVVVSHLHADHVGGMSGALRGRAVGGIAVGPSRQPGAALRRLGVQAREAGTTVVALGAGQRLTWPGLVLDVLGPVHPALDVDPGDGTAVNDGSLVVRAQTPAGSVLLTGDVEIAAQADLLTAGVPLRADVLKMPHHGSRYSLREFLAAVAPRVVLVSVGAGNSYRHPDPQLLGVLGSAGVAVRRTDHDGDTAVVAGASTDQGGPSVVSRGDPLPGRRRRARPGRRRPCSVAAGERLAHGLAGRRDRRARGDAVGDGVEGLQAVTGDEQDGLGVGVDLAGLDQLLRGRDGDATGGLGEDTLGAGQQLDGVAHLVVGDVADRAPGAAHRVQHVRAVGRVADRQRAGDRVRLDGADDVVALGERRRDRRAAGGLRAEHLVRGRLDEPELAELLETLVDLGQLRAGRDRDDDLLGQAPAELLGDLVAQRLRTLGVVRADVDVDERPLLVLRRELGGEPVDVVVVAVDGQQRAAVDGGGEDLGLLQRRRDQHDRVPPGARRRGGDGVGEVARRGAAQHGEAQLAGGGEGDGDDAVLEGVRRVAGVVLDPQGAHAQLGGEPVGLDQPRHARLGVGVRLHVRRHGQQVAVAPDRLRAGLDRLTRDGGEVVGHLERAETLRTRELRRQGCLVAALAAGEGTGRTEVEAGGARRRNRSHRRISSSSPHEAGRNWHRDRHTRWSCDAGCRGVNGPFPLPLWMSHIRLCEPGSTVMRSVLPSTVRHVLRRREVAVRDLGGGSRPRPVLGHDEGVTPPAADATPPHPVHLVVGEEELLAERAVQDIVTRSRAVDPDTDVRRVRIGELAPEDLAEHLSPSLFAEGRVVVLTSAQEVAKDMATAVLRYAAEPADGIVLVLVHHGGARGKSFADDLRKAGAEVIRCDRLTRPAERADFVRAEVRRLGGKITGDALEVLMEAVGSDLRELASAAGQLVADTGGAIDEKSVRRYHRGKAESSGFTVADKVVAGDREGALEALRWALVLGVAPVLVADALADAVRTLAKVGSAGRGDPNRLASSLGMPPWKIRKAQGQVRSWRPEGIAVAFAAAAEANADVKGAAADPEFALERAVRRIIDARDMR*