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cn_combo_scaffold_6648_5

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(3407..3772)

Top 3 Functional Annotations

Value Algorithm Source
Integrase catalytic region n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3J779_FRASU similarity UNIREF
DB: UNIREF100
  • Identity: 65.5
  • Coverage: 110.0
  • Bit_score: 138
  • Evalue 4.80e-30
integrase catalytic subunit similarity KEGG
DB: KEGG
  • Identity: 65.5
  • Coverage: 110.0
  • Bit_score: 138
  • Evalue 1.30e-30
Integrase catalytic region {ECO:0000313|EMBL:ADP84443.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.5
  • Coverage: 110.0
  • Bit_score: 138
  • Evalue 6.60e-30

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Taxonomy

Frankia sp. EuI1c → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 366
ATGGCGATCGACTCGCGCGGCACCAGCGGTCAGGTCCCGGACGGGAGCATCCACGGCGATCACGGCACCCAGTCACCTCGTGGATCTTCACCGGGCCCGCACAGCGGGCCTGCTGCCTCACTGGGCAGCGTCGGCGACCCCAACGACAACGCCGTCGCCGAGGCCTTCTGGGGCCGGATGCAGACCGAGCTACTCGACCGGCAGCATTGCCGCACCCGCATCGAGCTCGCGAACGCAATCTTCGAATACATCGAGGGCTTCTACAACCGCTGCCGCCGACACTCCGCACTGGACTGGATGAGCCCCGTACAGTTCGAAACCATTGACCGCCCGTCGAGCCTGATCTCCTCACCGACGTGTCCGTGA
PROTEIN sequence
Length: 122
MAIDSRGTSGQVPDGSIHGDHGTQSPRGSSPGPHSGPAASLGSVGDPNDNAVAEAFWGRMQTELLDRQHCRTRIELANAIFEYIEGFYNRCRRHSALDWMSPVQFETIDRPSSLISSPTCP*