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cn_combo_scaffold_6648_7

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(4191..4580)

Top 3 Functional Annotations

Value Algorithm Source
Integrase catalytic region n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3J779_FRASU similarity UNIREF
DB: UNIREF100
  • Identity: 66.7
  • Coverage: 129.0
  • Bit_score: 167
  • Evalue 7.80e-39
integrase catalytic subunit similarity KEGG
DB: KEGG
  • Identity: 65.9
  • Coverage: 129.0
  • Bit_score: 166
  • Evalue 6.40e-39
Integrase catalytic region {ECO:0000313|EMBL:ADP84443.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.9
  • Coverage: 129.0
  • Bit_score: 166
  • Evalue 3.20e-38

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Taxonomy

Frankia sp. EuI1c → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 390
GTGCCGAAGCCCTGCCCGCCGGAGTTCCGGCGACGCGCTCTTGGCCTGCTCGCCTCGGAGCGCTCAGTACGCGACGTGGCGACGTCTTTGGGCGTCGTGGAGTCGTGCCTGCATCGCTGGAAGTCCCGGGATCTGTTCGAGCGCGGGCTCAAGACCCTGACCCCGGAGCAGGTTGGGTCCGCTGCGCTCACCGCGGCCAAGGCGCGGATCGCCGAGCTGGAGACCGAGGTCAAGATCCTGCGCAAGGCAGCGGCTGCAATGGAGAAGGTGGAGCCCCCAAAAGCCCGGTTCGTCCTCGTCGCGGAACTGGCCGCTGAGGGCGTCCCGGTCAAGCAGGCCTGTGTGTCCCTCGGGGTGTCCCGGGCGGGCTTCTACGAAGCTCGCAGTTGA
PROTEIN sequence
Length: 130
VPKPCPPEFRRRALGLLASERSVRDVATSLGVVESCLHRWKSRDLFERGLKTLTPEQVGSAALTAAKARIAELETEVKILRKAAAAMEKVEPPKARFVLVAELAAEGVPVKQACVSLGVSRAGFYEARS*