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L1_008_000M1_scaffold_248_159

Organism: L1_008_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 20 / 38 MC: 16
Location: comp(207535..208530)

Top 3 Functional Annotations

Value Algorithm Source
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 331.0
  • Bit_score: 649
  • Evalue 2.90e-184
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 331.0
  • Bit_score: 649
  • Evalue 1.40e-183
DNA-directed RNA polymerase subunit alpha n=8 Tax=Bifidobacterium RepID=E3ERA8_BIFBS similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 331.0
  • Bit_score: 649
  • Evalue 1.00e-183

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Taxonomy

Bifidobacterium bifidum → Bifidobacterium → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 996
GTGCTTATCGCACAGCGTCCGACACTTACCGAGGAATCCATCAATCCGCAGCGTTCCCGTTTCGTCATCGAGCCGCTTGAGCCCGGTTTCGGATACACGCTTGGTAATTCGCTGCGCCGCACACTGCTGAGCTCGATTCCGGGCGCGGCGGTCACTTCCGTGCGTATTTCCGGTGCCCTGCATGAGTTCACCACTCTGCCGGGTGTCGTGGAAGACGTCACTGAGATTCTGCTGAACATCAAGGGCATCGTGCTGACCAGCGAGTACGACGAGCCCGTGGTCATGTATCTGCGCAAGAGCGGCAATGGTGAAGTCACCGCGGGCGACATCACACCGCCCGCCGGTGTCACCATCGCCAACCCGGATCAGCACATCGCGACCCTCGCCGACGACGGCGAACTCGAAATCGAGTTCACTGTCGAGCGTGGCCGTGGCTACGTCCCCGCGCAGATGAACAAGCAGGACACCGATGAGATCGGTCGTATCCCGGTCGATTCGATTTACTCCCCGGTGCTCAAGGTAAGCTACAAGGTCGAGGCCACGCGCGTCGAACAGCGCACTGATTTCGACAAGCTTATTCTGGACGTGGAGACCAAGCCGGCCATTTCACCGCGCGATGCGGTGGCTTCCGCTGGCTCCACCCTGGTTGAGCTGTTCGGCCTGTGCCGTGAGCTCAACGTGCAGGCCGAAGGCGTCGAAGTCGGTCCCGCTCCCGTCGCGGAGGAGACCAACCCCGAGATGGCCGTCCCGATCGAGGATCTCAACCTCACGCAGCGCAGCTACAACTGCCTCAAGCGCGAGGGCATCCACACGATCGGCGAGCTTGTCGCTCACACCGAGCAGGATCTGCTGGATATTCGCAATTTCGGTATGAAGTCGATCGACGAGGTCAAGGACAAGCTGCAGTCCATGGGACTGTCGCTGAAGTCGTCGCCGCTGGGCTTCGATACCAACAATTTGGAAGGTGGTACGTTCTTCTCGCCTGAGGACGAGTGA
PROTEIN sequence
Length: 332
VLIAQRPTLTEESINPQRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSVRISGALHEFTTLPGVVEDVTEILLNIKGIVLTSEYDEPVVMYLRKSGNGEVTAGDITPPAGVTIANPDQHIATLADDGELEIEFTVERGRGYVPAQMNKQDTDEIGRIPVDSIYSPVLKVSYKVEATRVEQRTDFDKLILDVETKPAISPRDAVASAGSTLVELFGLCRELNVQAEGVEVGPAPVAEETNPEMAVPIEDLNLTQRSYNCLKREGIHTIGELVAHTEQDLLDIRNFGMKSIDEVKDKLQSMGLSLKSSPLGFDTNNLEGGTFFSPEDE*