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L1_008_000M1_scaffold_1459_16

Organism: L1_008_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 20 / 38 MC: 16
Location: comp(12905..16480)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.2
  • Coverage: 1200.0
  • Bit_score: 2121
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 78.2
  • Coverage: 1186.0
  • Bit_score: 1851
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PL90_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 89.2
  • Coverage: 1200.0
  • Bit_score: 2121
  • Evalue 0.0

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Taxonomy

Subdoligranulum variabile → Subdoligranulum → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3576
ATGGAAAATAAAGAGTTCGATTCTATCAAGATCGGCCTTGCTTCTCCCGACCAGATCCGTGCCTGGAGCTATGGCGAGGTCAAGAAACCTGAAACCATCAACTACCGCACCCTGAAGCCGGAGCGCGACGGCCTGTTCTGCGAGCGCATTTTTGGACCTACCAAGGACTGGGAATGCCACTGCGGCAAGTATAAGCGCATCCGCTATAAGGGCAAGATCTGCGATAAGTGCGGTGTCGAAGTTACCCGCGCTAAGGTCCGCCGCGAGCGCATGGGCCACATTGAGCTGGCTGCACCCGTTTCGCACATCTGGTATTTCAAGGGCATTCCCAGCCGCATTGGCCTGATGCTGGACATCGGCCCCCGCCAGCTGGACAAGGTGCTCTACTTTGCAAACTATATCGTTACCGATCCCGGCTTTACTCCGCTGGAGAAAAAGCAGCTCCTGACCGAACGCGAGTACAAGGAGATGCGGGAAAAGTACGAGGATACCTTTGAAGCCGGCATGGGCGCCGAAGCCGTCCAGAAGCTGCTGGCTGAGATCGACCTGGAAGCTCTGTCCGCAGAGCTGCATGAGGAACTGGAAAAGGCTACCGGCCAGAAGCGCGTCCGCCTGTTGAAACGCCTGGAGTGCGTTGATGCATTCCGCCTGTCCGGCCAGCGCCCGGAGTGGATGATCCTGAACGTTGTTCCGGTCATTCCGCCGGATATCCGCCCCATGGTCCAGCTGGATGGCGGTCGCTTTGCGACTTCCGACCTGAACGATCTGTACCGTCGCGTGATCAACCGCAACAACCGTCTGAAGCGCCTGCTGGAGCTGGGCGCTCCCGACATCATCGTGCGCAACGAAAAGCGCATGCTGCAGGAAGCAGTTGACGCCCTGATCGATAACGGCCGCCGCGGCCGCCCGGTCACTGGCCCCAACAACCGCGCCCTCAAGAGCCTTTCCGATATGCTGAAGGGCAAGCAGGGCCGCTTCCGCCAGAACCTGCTGGGCAAACGTGTTGACTACTCTGGCCGTTCCGTTATCGTTGTCGGCCCTGAGCTGAAGATGTACCAGTGCGGTCTGCCCAAAGAGATGGCTCTGGAGCTGTTCAAGCCCTTCGTTATGAAGGACCTGGTCCAGAAGGGCATTGCCTCCAACATCAAGGCTGCCCGCAAAAAGGTCGAGCGTGCTTCCACCGAGGTGTGGGACTCTCTCGAAACCGTCATCAAGGGCCATCCCGTTCTGCTGAACCGTGCACCTACCTTGCACCGCCTGGGCATTCAGGCATTTGAGCCCGTTCTGGTCGAAGGCCACGCCATCAAGCTGCACCCGCTGGTCTGCACCCCCTTCAACGCTGACTTCGACGGCGACCAGATGGCTGTCCATCTGCCGCTGTCCACCGAAGCACAGCGCGAAGCCAAGATGCTGATGCTGGCTTCCGGCAACCTGCTGAAGCCGTCTGACGGCGAACCCGTCACCGTGCCCACGCAGGATATGATCCTGGGCTCTTACTACCTGACCATGGTCAACCCCGAAGACCCCGGCCACGACAAGGTGTTCCGCGATGAGGACGAAGCCCTGATGGCTTACGCCGAGCATATCGTCACCCTGCAGGCTCCCGTTAAGGTGCGCCGCACCATGGACTTTGGCAACGGCCCCGAAACCGCCCTTGTCACCACCACTGTCGGCAAGATCATCTTCAACACCCCCATCCCGCAGGATCTGGGCTATGTGGATCGCACCGACCCCGAACATAAGTTCGATTACGAAGTCGATTTCCAGGTCACCAAGAAGAAGCTGCCCGACATCATCAGCCGCTGCCTGACAAAGCATGGCACCAAGCGCTGCGCTATCATGCTGGACCACATCAAGGCACAGGGCTATAAGTATTCCACCCTTTCCGCCATTACTGTTGCCGTACCTGACGCTATCATCCCCGAAGAGAAGCCGGAGATCCTGGCTGCGGCTGACAAGAAGGTTGAAAAGGTCATGAAGAACTTCAACCGTGGTCTTATCTCTGATGAAGAGCGCTATAAGAACACCGTTGAGATCTGGCAGGCAGCTACCGAGGAAGTTTCCAACGCTCTGTCTACCAACCTGAAGACCCACCACCAGCGCAACCCCATCTATATGATGTCCGACTCTGGTGCTCGTGGTTCTATGGACCAGATCAAGCAGCTGGCCGGCATGCGCGGCCTGCTGGCTAACACCGCAGGTAAAACCCTGGAAATGCCTATCCGTGCAAACTACCGCGAAGGCTTGAACATCTTGGAGTACTTCATCTCTTCTCGAGGCGCTCGTAAAGGTTTGACCGATACCGCACTGCGTACTGCTGACTCTGGCTACCTGACCCGCCGTCTGGTTGACGTTTCTCAGGAAGTCATCATCCGCGAGGAAGACTGCCACGCTACCGAGGGTATCCTCGTCAGCGAGATCAGCGAAGGCAACGCTACCATCGAAAGCTTCTCCGAGCGTCTGATTGGCCGTTATGCTCTGCATGACGTGATGGATCCCAAGACCGGCGAACTCATTGTGTCCAAGGACAAGATGATGGATATGTTCGACGCTGAAAAGATCAAAGCTGCCGGTATTACCGAGCTGGAGATCCGCAGCGTGATGACCTGCCGTGCTCACGTTGGCGTCTGTGCCCGCTGCTATGGCTCCAACATGTCCAACGGCCAGTGCGTTAAGGTCGGTGAATCCGTCGGTATCATTGCGGCACAGTCCATCGGCGAACCCGGTACTCAGCTGACCATGCGTACCTTCCATACTGGCGGTATCGCATCTGCTGAAGATATTACTCAGGGTCTTCCGCGTGTTGAAGAACTGTTCGAGAGCCGCCGCCCGAAGGCAATGGCTATCATGTCCGAGATCGCCGGTACCGTCCATATTGACGATACCAAGAAGAGCCGCCACGTTGAAGTGACCGGTGTTGACGATAACGGCGCACCGGTTACCAAGAGCTACCTGATCCCGTTCGGCCACCGCCTGAAGGTGATGGAGGGCGATGTGCTCGTCAAGGGCGCACTGTTGACCGAAGGCCATGCTTATCCGCAGGATATTTTGGCTGTCAAGGGCCGCATTGCTACCCAGAACTACCTGATCAGCGAAGTCCAGAAGGTTTACCGTCTGCAGGGCGTTGAAATCAACGATAAGCATATCGAAGTTATCGTCCGCCAGATGATGCGTAAGGTTCGCATTGACGATGCAGGTTCCAGCGAGTTCATCATGGGCAGCGTTGTCAACCGCCGCGATGTGATGATCGAGAACGAGAAGATTCAGGAACGCATTGATGCAGGCGAAACCGACCTGAAGCTGGTCCAGGCCAGTCAGATCCTGCTTGGTATCACCAAGTCCAGCTTGGCAACCGACAGCTTCCTGTCCGCTGCATCCTTCCAGGAAACCACCCGCGTTCTGACCGAAGCCGCCATCAAGGGCAAGGTTGACCCGCTGGCCGGTCTGAAGGAAAACGTCATCATCGGTAAGCTGATCCCCGCCGGAACCGGTTTGCCGGAGGTTGAAGAAGAGCTGGCTCGCGCCGAGGAAATCCGCGATGCCGAAGGCAGCGCTTACGACCACGCTGAAAAGTAA
PROTEIN sequence
Length: 1192
MENKEFDSIKIGLASPDQIRAWSYGEVKKPETINYRTLKPERDGLFCERIFGPTKDWECHCGKYKRIRYKGKICDKCGVEVTRAKVRRERMGHIELAAPVSHIWYFKGIPSRIGLMLDIGPRQLDKVLYFANYIVTDPGFTPLEKKQLLTEREYKEMREKYEDTFEAGMGAEAVQKLLAEIDLEALSAELHEELEKATGQKRVRLLKRLECVDAFRLSGQRPEWMILNVVPVIPPDIRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLELGAPDIIVRNEKRMLQEAVDALIDNGRRGRPVTGPNNRALKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKMYQCGLPKEMALELFKPFVMKDLVQKGIASNIKAARKKVERASTEVWDSLETVIKGHPVLLNRAPTLHRLGIQAFEPVLVEGHAIKLHPLVCTPFNADFDGDQMAVHLPLSTEAQREAKMLMLASGNLLKPSDGEPVTVPTQDMILGSYYLTMVNPEDPGHDKVFRDEDEALMAYAEHIVTLQAPVKVRRTMDFGNGPETALVTTTVGKIIFNTPIPQDLGYVDRTDPEHKFDYEVDFQVTKKKLPDIISRCLTKHGTKRCAIMLDHIKAQGYKYSTLSAITVAVPDAIIPEEKPEILAAADKKVEKVMKNFNRGLISDEERYKNTVEIWQAATEEVSNALSTNLKTHHQRNPIYMMSDSGARGSMDQIKQLAGMRGLLANTAGKTLEMPIRANYREGLNILEYFISSRGARKGLTDTALRTADSGYLTRRLVDVSQEVIIREEDCHATEGILVSEISEGNATIESFSERLIGRYALHDVMDPKTGELIVSKDKMMDMFDAEKIKAAGITELEIRSVMTCRAHVGVCARCYGSNMSNGQCVKVGESVGIIAAQSIGEPGTQLTMRTFHTGGIASAEDITQGLPRVEELFESRRPKAMAIMSEIAGTVHIDDTKKSRHVEVTGVDDNGAPVTKSYLIPFGHRLKVMEGDVLVKGALLTEGHAYPQDILAVKGRIATQNYLISEVQKVYRLQGVEINDKHIEVIVRQMMRKVRIDDAGSSEFIMGSVVNRRDVMIENEKIQERIDAGETDLKLVQASQILLGITKSSLATDSFLSAASFQETTRVLTEAAIKGKVDPLAGLKENVIIGKLIPAGTGLPEVEEELARAEEIRDAEGSAYDHAEK*