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cn_combo_scaffold_29_14

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: comp(12674..13054)

Top 3 Functional Annotations

Value Algorithm Source
helicase SNF2 n=1 Tax=Variovorax paradoxus RepID=UPI00036F30F5 similarity UNIREF
DB: UNIREF100
  • Identity: 83.3
  • Coverage: 126.0
  • Bit_score: 197
  • Evalue 6.90e-48
snf2 superfamily protein similarity KEGG
DB: KEGG
  • Identity: 86.5
  • Coverage: 126.0
  • Bit_score: 213
  • Evalue 4.40e-53
SNF2 superfamily protein {ECO:0000313|EMBL:ADU34629.1}; Flags: Precursor;; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Va similarity UNIPROT
DB: UniProtKB
  • Identity: 86.5
  • Coverage: 126.0
  • Bit_score: 213
  • Evalue 2.20e-52

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 381
ATGACCGCCTCGAAGCTCCTCTCCGCCATCTCCATCGCCCTGCTGGCCGCCGCCGGTGCCGCCCACGCCGAAACCTACGAAGGCGTGCATCAACTGACCTCGGCCGCCAGCCGCGCCGAAGTCGCCAGCCAGGCCGTCGTGGCCGCGCACAGCGCCAACCCCTACGCCACCGGCGCCAACTCCGGCCCGGCCCAGGTGATCGTGTCGAACACCAGCCGCGCCGCCCTCCGCGCTGAAGCCGTTGCCGCCGCGCACAGCGCCGACCCGTACGCCGAAGGCGCTTCGTCGGGCGTGGCTCCCGTGGTGGCCAGCACCGTGGACCGCGCCGCAGTGCGTGCAGCAGCCCGCGCCGCAGCTCGCGGTGACGCCCTGCCGCTGTAA
PROTEIN sequence
Length: 127
MTASKLLSAISIALLAAAGAAHAETYEGVHQLTSAASRAEVASQAVVAAHSANPYATGANSGPAQVIVSNTSRAALRAEAVAAAHSADPYAEGASSGVAPVVASTVDRAAVRAAARAAARGDALPL*