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cn_combo_scaffold_29_20

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: comp(16660..17955)

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Variovorax paradoxus RepID=UPI000363F1DF similarity UNIREF
DB: UNIREF100
  • Identity: 95.6
  • Coverage: 431.0
  • Bit_score: 808
  • Evalue 3.80e-231
MFS permease similarity KEGG
DB: KEGG
  • Identity: 56.2
  • Coverage: 425.0
  • Bit_score: 482
  • Evalue 1.30e-133
Probable MFS permease {ECO:0000313|EMBL:CAP45237.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strai similarity UNIPROT
DB: UniProtKB
  • Identity: 56.2
  • Coverage: 425.0
  • Bit_score: 482
  • Evalue 6.70e-133

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Taxonomy

Bordetella petrii → Bordetella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1296
ATGAGCACACTCGCCCCACGCGCCGCCGAGCTTTCCGACCCCGCCGAGCCTGCCTCCCGGCAGAGCACGCTGCGGGTCATCACCGCCATCTCCATCGGCAATGCCCTGGAATGGTTCGAGATCGTGATCTACGGCTTTCTCGCCGTGACCATCTCCAAGCTGTTCTTTCCCGCCGAGAACGACACCGTGTCGCTGCTCATCACGCTGGGCACCTTCGGCGTGACCTTCGTGATGCGCCCGGTCGGCTCGCTGGTGCTCGGTGCCTATGCCGACGCCAGGGGGCGCAAGAACGCGCTGACGCTGTCGATGGCGCTCATGCTGCTCGGCACGCTGCTGATCGCGGTGTCGCCGACCTTCGCGCAGATCGGGCTGTGGGCGCCGGGGCTCGTGATCCTCGCGCGGCTGCTGCAGGGCTTCGCGGCCGGCGGCGAGTTCGGCAGCGCCACCGCGCTGCTGGCCGAGCAGGACCCGCGCCGGCGCGGCTTCTTCTCGAGCTGGCAGTTCGCGAGCCAGGGCATCACCACCTTCCTGGCGGCGGGCTTCGGCATGGGGCTCAACGCGCTGCTCACGCCCGAGCAGCTGCTGTCCTGGGGCTGGCGCATTCCGTTCTTCTTCGGCCTGCTGATCGGGCCGGCGGGCCTGTACATCCGCCGCCACCTGGACGAAGGCATGGAGTTCAAGCGCGCGGCCCAGGAAGCCACGCCGGTGCGCACCACGCTGGTGGACCAGCGCGGGCGCACGCTGGCGGCGATGGGGCTCATCATCCTCGCGACCATCGTGGCCTACACGGGCCTGTTCATGCCGACCTTCGCGGTGCGCCAGCTGGGCCTGCCGCCGTCGATGGCCTTCGCCGGCACCTTCTGGTTCGGCGTGCTGCAGTTCGCGCTGGTGCCGCTGTTCGGCAGCATGTCGGACCGGGTGGGGCGCGTGGTCATCATGCGCGGCGCCGCGCTGGTCATGCTGGTGATGATCGTGCCGCTGTTCTACCTGCTGGTGAACCATCCGTCGGTGCCGGCGCTGATGCTGGCGCTCACCGCCATGGGCGTGGTGGCCTCGGCCTACTGGGGCCCCATTTCCGCGGCCATGTCGGAGCTGTTCCCGGCGGCCACGCGGGGCACCGGCCTGTCGGTCAGCTACAGCTTCGGCGTGGCGATCTTCGGCGGCTTCGCGCCCTTCATCAGCGCCTGGCTCATCACCGCCACGGGCAGCAAGATCGCGCCGGCCTTCTACGTGGGCTTCGGCGTGCTGGTGAGCCTGGCAGCGCTGCGAGCGGCCCGCCGGTACGGCGTGAAATAG
PROTEIN sequence
Length: 432
MSTLAPRAAELSDPAEPASRQSTLRVITAISIGNALEWFEIVIYGFLAVTISKLFFPAENDTVSLLITLGTFGVTFVMRPVGSLVLGAYADARGRKNALTLSMALMLLGTLLIAVSPTFAQIGLWAPGLVILARLLQGFAAGGEFGSATALLAEQDPRRRGFFSSWQFASQGITTFLAAGFGMGLNALLTPEQLLSWGWRIPFFFGLLIGPAGLYIRRHLDEGMEFKRAAQEATPVRTTLVDQRGRTLAAMGLIILATIVAYTGLFMPTFAVRQLGLPPSMAFAGTFWFGVLQFALVPLFGSMSDRVGRVVIMRGAALVMLVMIVPLFYLLVNHPSVPALMLALTAMGVVASAYWGPISAAMSELFPAATRGTGLSVSYSFGVAIFGGFAPFISAWLITATGSKIAPAFYVGFGVLVSLAALRAARRYGVK*