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cn_combo_scaffold_29_23

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: 21807..22724

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000371AB51 similarity UNIREF
DB: UNIREF100
  • Identity: 94.4
  • Coverage: 304.0
  • Bit_score: 578
  • Evalue 4.50e-162
Transcriptional regulator {ECO:0000313|EMBL:EJL71355.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF31 similarity UNIPROT
DB: UniProtKB
  • Identity: 85.8
  • Coverage: 302.0
  • Bit_score: 529
  • Evalue 4.40e-147
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 40.1
  • Coverage: 304.0
  • Bit_score: 212
  • Evalue 1.40e-52

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 918
ATGAAGAACACCCACGACCGGCTCGACCTGCTGGACACTTTCATCAAGATCGGCGAGAGCGGATCGCTCAGCAAGGCTGCGCGCCTGCTGGGCACCACGCAGCCCACGGTAAGCCGCCGCCTGCTGGAGCTGGAGCGCCTGCTGGGCTGCAAGCTGGCCATCCGCAACACCGCCAACTTCTCGCTCACCGACGAGGGCCGCTCGCTGCTGGCGGAGGCGCACGACCTCACCGACCGCTGGTCGGGCCTGTCGCAGCGGCTGCTGGGCGGACAGAGCCGGCCCGAAGGCACGCTGCGCGTCATCGGCCCCTCGGGCTACGGCACCGGCTTCCTGACCGACGCGGTGACCGACCTGCGCGCCGCGCATCCGCAGTTGCGGGTCGAGCTCACGCTGACCGACCGCGTGGTCGATCTCGCGGCCTCGGGCGCCGAATGCTGGGTGTGCGTGGGCGAGGTTCGCGACCCCGGGCTGGTGTGCCGCCCGCTCGGGCGCATGGAGCGCGTGCTCATCGCCACGCCGGAGCTGCTCAAGCGCACCGGCCCGGTCACGCTGGCGCGGCTGCCGCAGCTGCCGTGCGTGGGACTGGTGCCCTACGTGACGGGCAATGTGCGCCTGATCGACCGCGGCGGGCGTTCACGCATCGTGGCGCTGGACACGCCCATCCGCACCGACAGCCTGCTGGCGAGCTATCGCGCGGTGCTCAACGGCGCGGGCATCGGCGCGGCGGCGCCGTGGATGTGCCACGACGACATGCAGGCCGGCCGCCTCAAGCGCGTGCTGCCGAACTGGTGGCTGGAGCCGATCGGCGTGCATGTCGCGCTGCCGCCGGGGCTGTACCGGCCGGCGCGCGTCACCGCGTTCGTGGAAGCCTTGCGCGCGCGCATGCACGCGCTGCCGGGGTTCAGGGTCGCGCAGTGA
PROTEIN sequence
Length: 306
MKNTHDRLDLLDTFIKIGESGSLSKAARLLGTTQPTVSRRLLELERLLGCKLAIRNTANFSLTDEGRSLLAEAHDLTDRWSGLSQRLLGGQSRPEGTLRVIGPSGYGTGFLTDAVTDLRAAHPQLRVELTLTDRVVDLAASGAECWVCVGEVRDPGLVCRPLGRMERVLIATPELLKRTGPVTLARLPQLPCVGLVPYVTGNVRLIDRGGRSRIVALDTPIRTDSLLASYRAVLNGAGIGAAAPWMCHDDMQAGRLKRVLPNWWLEPIGVHVALPPGLYRPARVTAFVEALRARMHALPGFRVAQ*