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cn_combo_scaffold_29_28

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: comp(26988..28010)

Top 3 Functional Annotations

Value Algorithm Source
Dipeptide transport system permease protein DppB n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RAN4_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 61.6
  • Coverage: 320.0
  • Bit_score: 403
  • Evalue 2.20e-109
Peptide ABC transporter permease {ECO:0000313|EMBL:KGJ07072.1}; TaxID=690417 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus similarity UNIPROT
DB: UniProtKB
  • Identity: 62.8
  • Coverage: 325.0
  • Bit_score: 413
  • Evalue 3.00e-112
binding-protein-dependent transport system inner membrane protein similarity KEGG
DB: KEGG
  • Identity: 60.1
  • Coverage: 338.0
  • Bit_score: 398
  • Evalue 1.50e-108

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Taxonomy

Paracoccus sphaerophysae → Paracoccus → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1023
ATGCGCAAGCTCGTCGCTCCGGCCGCGCTGCTGCGGTCCGGCCTGTCCTTTGCCCTGATGTTGCTGGTGCTGCTGCTGGTCACCTTCCTGATCGGCAAGGCGGCGCCCATCGATCCCGTGCTGCAGGTGGTCGGCGACCGCGCCTCGCCCGAGGCCTACCAGGAAGCCCGCCAGCGCATGGGCCTGGACCAGCCGATCGCCACGCAGTTCGTGCGCTACGTGGCCGACGCGGCAAAGGGCGATCTGGGTCGCTCGACCACGACGGGCCGCGCGGTTCTGGAAGACCTGCGCCAATATTTCCCGGCCACGCTGGAGTTGGCCACGCTGGGCATCTTGCTGGGCGTGGTGTTCGGCGTGCCGCTGGGCATGCTGGCGGCGCACCAGCACAACCGGTGGATCGACCAGCTGCTGCGGCTGGTCGGGCTGCTGGGCTACTCGGTGCCGGTGTTCTGGCTCGGGCTGGTCGGCCTGCTGATCTTCTACGCCAGGCTGGGCTGGGTCGGCGGGCCGGGGCGGCTGGACGACATCTACCAGTACACGGTCGACAGCTGGAGCAACCTGGTGCTGGTCGACACGCTGCGCGCCGGCAACGGCGAAGCCTTCCGCAACGGCCTGTCGCACCTGGTGCTGCCGGCCGCGCTGCTGGGCTATTTCTCGCTGGCCTACATCTCGCGCATGACGCGGGCCTTCTTCCTCGAGGAGCTGGGCAAGGAATACGTGCTCACGGCGCGCGTCAAGGGCGCGTCGGAGCTGCAGGTGCTGGTGCGCCACGTGCTGCCCAACGTGGCCGCGCCGCTGGTCACGGTGATCGCGCTGTCGTATGCGGTGCTGCTCGAAGGCGCGGTGCTGACCGAGACGGTGTTCTCCTGGCCCGGCATCGGGCTGTACGTGACCAACGCGCTCTTCAGCGCCGACGTGGCCGCCGTGCTCGGTGGCACCTTGCTGGTGGGCCTGTGCTTCGTGGTGCTCAACACCGCGTCCGACGTGCTCGGCTATCTGATGGACCCGAGGGCCAGGTCATGA
PROTEIN sequence
Length: 341
MRKLVAPAALLRSGLSFALMLLVLLLVTFLIGKAAPIDPVLQVVGDRASPEAYQEARQRMGLDQPIATQFVRYVADAAKGDLGRSTTTGRAVLEDLRQYFPATLELATLGILLGVVFGVPLGMLAAHQHNRWIDQLLRLVGLLGYSVPVFWLGLVGLLIFYARLGWVGGPGRLDDIYQYTVDSWSNLVLVDTLRAGNGEAFRNGLSHLVLPAALLGYFSLAYISRMTRAFFLEELGKEYVLTARVKGASELQVLVRHVLPNVAAPLVTVIALSYAVLLEGAVLTETVFSWPGIGLYVTNALFSADVAAVLGGTLLVGLCFVVLNTASDVLGYLMDPRARS*