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cn_combo_scaffold_29_29

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: comp(28021..29595)

Top 3 Functional Annotations

Value Algorithm Source
Extracellular solute-binding protein n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5C0V9_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 56.6
  • Coverage: 525.0
  • Bit_score: 602
  • Evalue 5.00e-169
Peptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:KGM34718.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.; similarity UNIPROT
DB: UniProtKB
  • Identity: 59.6
  • Coverage: 522.0
  • Bit_score: 611
  • Evalue 1.20e-171
ABC-type dipeptide transport system, periplasmic component similarity KEGG
DB: KEGG
  • Identity: 55.0
  • Coverage: 525.0
  • Bit_score: 585
  • Evalue 1.40e-164

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Taxonomy

Inquilinus limosus → Inquilinus → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1575
TTGAATCCTCGAATTTGCGCGGCAGTCGCAGGCATCTTCCTCTCGTTGTCCGCGTGGGCCGCCACGCCCAAGGACACGCTGGTGGTGGTCAAGAACATCGACGACATCGTGAGCCTCGATCCGGCCGAGGCCTTCGAGTTCTCCAGCGGCGAGGTGGTGACCAACATCTACGAACGGCTGGTGCAGTACGACGCGAAAGATCCGACGCTGCTCAAGCCCGGCCTGGCCTCGGCCTGGAAGCCGGCCGCCGACGGCAAGAGCATCGAGTTCACGCTGCGCAAGGGCGCCGCGTTCGAGAGCGGCAATCCGGTGCGTCCGGACGACGTTGTGTTCTCCTTCAAGCGCGTGCTGAAGCTGAACAAGGCGCCGGCCTTCATCCTGAGCCAGCTGGGCTGGACCGCCGACAACATCGACCAGATGGCGCGCAAGGGCGCCGCGCCCGACACGCTGGTGCTGGGCTGGAGCGGCGACTTCGGCCCCGCCTACGTGCTGAGCGTGCTGGCCGCGCGGCCGGGCGCCATCGTCGACGAGAAGCTGGTGCTGGCCAACGAGAAGGCGGGCGACCTGGGCAACCAGTGGCTGAACCGCAATTCCGCCGGCAGCGGCCCCTACAAGCTGAAGCTCTACAAGCCCAAGGAAGTGCTGTTGCTCGAGGCGAACAAGAAGGCCGCCAACCCGCCCAAGACCGGCAACGTGCTGATCAAGAGCGTGGCCGAGTCCGCCACGCAGCGCCTGCTGATCGAGTCCGGAGACGCCGACATCGCCCGCGACCTCGCCTCCGACCAGCTCGACGCGCTGAAGACCCGCACCGACGTGCGCATCGAGGAATTCCCCGCGGCCGCCGTGCACTTCATCGCGCTCAACCTCAAGAACGAGAAGCTGCGCAACCCGGCCATCTGGGAAGCCATGCGCTACCTGGTGGACTACGACGGCATCTCCACGCAGCTGCTCAAGGGCCAGATGCGCACGCACCAGGCCTTCCTGCCGGTGGGCTTCGCGGGCGCGCTGACCACCAACCCCTACAAGGCCGACCCGGAGCGCGCCAAGGCCATCCTCGCCAAGGCGGGCATCAAGGGCCTGGAAATCGACATGGACCTGATCAACGCGCAGCGCTTCATGGACATGGCGCAGTCGATGCAGGCCACCATGGCCAAGGCGGGCATCAAGCTGAACCTGCTGCCCGGCACCGGCGCCCAGGTGCTCACGCGCTACCGCGCCCGCAAACACGAGGCCATCCTGCTGTACTGGGGCCCCGACTTCTTCGATCCGCATTCGAACGCCAAGTCGTTCGCGTACAACGTGGACAACAGCGACAGCGCCTACCAGAGCACCACGACGTGGCGCAACTCCTGGCTCGTTCCGGAGCTGTCGGCCAGGACCATGGCGGCGCTGAAGGAGGTCGACCCCGTCAAGCGCGCCGCGGCCTACCAGGACCTGCAGCGCGAAGTGCAGGCCAGGTCGCCGTTCATCATCACCTTCCAGGAACAGAACCGGGTCGCCTTGCGCAGCAACGTCAAGGGCTACGTGCAGGGCACGGTGGCCGACCTGATCAAGTACGACGCGGTCACCAAGTAG
PROTEIN sequence
Length: 525
LNPRICAAVAGIFLSLSAWAATPKDTLVVVKNIDDIVSLDPAEAFEFSSGEVVTNIYERLVQYDAKDPTLLKPGLASAWKPAADGKSIEFTLRKGAAFESGNPVRPDDVVFSFKRVLKLNKAPAFILSQLGWTADNIDQMARKGAAPDTLVLGWSGDFGPAYVLSVLAARPGAIVDEKLVLANEKAGDLGNQWLNRNSAGSGPYKLKLYKPKEVLLLEANKKAANPPKTGNVLIKSVAESATQRLLIESGDADIARDLASDQLDALKTRTDVRIEEFPAAAVHFIALNLKNEKLRNPAIWEAMRYLVDYDGISTQLLKGQMRTHQAFLPVGFAGALTTNPYKADPERAKAILAKAGIKGLEIDMDLINAQRFMDMAQSMQATMAKAGIKLNLLPGTGAQVLTRYRARKHEAILLYWGPDFFDPHSNAKSFAYNVDNSDSAYQSTTTWRNSWLVPELSARTMAALKEVDPVKRAAAYQDLQREVQARSPFIITFQEQNRVALRSNVKGYVQGTVADLIKYDAVTK*