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cn_combo_scaffold_52_8

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: 6144..6407

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, XRE family n=1 Tax=Burkholderia sp. H160 RepID=B5WDM4_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 47.7
  • Coverage: 65.0
  • Bit_score: 65
  • Evalue 2.80e-08
Helix-turn-helix domain protein {ECO:0000313|EMBL:KDB08399.1}; TaxID=1192124 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholde similarity UNIPROT
DB: UniProtKB
  • Identity: 46.3
  • Coverage: 67.0
  • Bit_score: 66
  • Evalue 3.00e-08
DNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 46.2
  • Coverage: 78.0
  • Bit_score: 64
  • Evalue 1.30e-08

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Taxonomy

Burkholderia sp. lig30 → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 264
ATGGAAATTGGCAGTGGTGGAGACTTCGCAAGACAGCTTTTGTCATGGAATCTCAAAAAGCATCGGGCAAAGCTAGGTCTGTCTCAGGAAGACCTGGGCACTCGCTGCGGGTTTCACCGCACCTACGTCAGTCGTATTGAGCGGCTTGAGACGGGCCCTACCATCGACAATGTGCATCGCCTGGCCGTCGGACTTGGGACGACGATCGGGGAACTGTTCAACGAACGCGAATTCCACAGCGCGGGCGAACCGTCCAGTCACTGA
PROTEIN sequence
Length: 88
MEIGSGGDFARQLLSWNLKKHRAKLGLSQEDLGTRCGFHRTYVSRIERLETGPTIDNVHRLAVGLGTTIGELFNEREFHSAGEPSSH*