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cn_combo_scaffold_52_18

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: comp(18530..19516)

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide kinase (Kdo/WaaP) family n=1 Tax=Variovorax sp. CF313 RepID=J3CJ93_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 84.2
  • Coverage: 330.0
  • Bit_score: 570
  • Evalue 1.30e-159
Lipopolysaccharide kinase (Kdo/WaaP) family {ECO:0000313|EMBL:EJL72571.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Vari similarity UNIPROT
DB: UniProtKB
  • Identity: 84.2
  • Coverage: 330.0
  • Bit_score: 570
  • Evalue 1.90e-159
serine/threonine protein kinase similarity KEGG
DB: KEGG
  • Identity: 82.6
  • Coverage: 328.0
  • Bit_score: 552
  • Evalue 8.00e-155

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 987
ATGCTGTCGCTGCTCGCTCTCAGCTGCCCTCAATGTTCCGCGCCGCTGCCGCGAGCCGCCCGCTGGCGCACCGTCGATTGCAGCTACTGCGGTGCCACCATCGTGCGCGGCGAGGAAATCGTCGAGCGCGAGAGCTTCCGCGCCGCGCTGCGCAGGGCGAATGCCGATGTGCCCGGCGGCCACATCCTCACCTGGCGCGGCGCGCGCTACCGCGTGCTGGCCCCGCTGTCCACCGGCGAGCACAGCGACGTGCTGCTGGCAGAGCGCCTGGGCGCGCTGCCCGAGCGCGTGACCATGAAGCTTGCCCGCGACAGCGCCGCCAACGGCGTGCTGCTGCGCGAAGCCTCGGTGCTGCAGGCCTTGCAGGACCTGTCGGCGCCTGGTGCCGCCTACTTCACGCGCCGCCTGCCGCAGTGTGTGGGCACCGGCATTGCCGAAGGACTGGGCGAGGGCAACCGCCAGGCGCTGGTGCTGCGTCACCCGACCGGCTTCTGGGGCAGCCTGCAGGACGTGGCGCAGGCCAATCCGCAAGGCATCGACCCGCGTCATGCGGTGTGGGTCTGGCGCCGCATGCTGGAGGTGCTGGCCTTCGTGCACGGGGCCGGCTGGACGCACCGCGGCCTGTCGCCCGCGCATGCGCTCGTGCATCCGCGCGACCACGGCGTGCTGCTGATCGGCTGGTCGCGCGCGCAGCACGCCACCGGCGTGGCCCACAAGGCAGCGGCGACGCGCGATCTCATGCAGGCAGCGTGGACCGTGCGTGCCCTGCTGCACGGCGGCGAGGGTGACGCAGCCGGTGCCCCTGGTTACGGCGCCCGCACCCCCGCGCCGCTCGCGACCCTGCTGCGCCAGTGCAGCGAAGACGCCGCCACCTGCGAGCGGCTCGGCGCGCCGGGTATCGAGCAGGCGCTGTCCGCGGCCTCGCGCGAAGCCTTCGGTGCGCCGCAGTTCGTTCATTTCGATCCAGCGCCGCGCAGCGGCGGCTGA
PROTEIN sequence
Length: 329
MLSLLALSCPQCSAPLPRAARWRTVDCSYCGATIVRGEEIVERESFRAALRRANADVPGGHILTWRGARYRVLAPLSTGEHSDVLLAERLGALPERVTMKLARDSAANGVLLREASVLQALQDLSAPGAAYFTRRLPQCVGTGIAEGLGEGNRQALVLRHPTGFWGSLQDVAQANPQGIDPRHAVWVWRRMLEVLAFVHGAGWTHRGLSPAHALVHPRDHGVLLIGWSRAQHATGVAHKAAATRDLMQAAWTVRALLHGGEGDAAGAPGYGARTPAPLATLLRQCSEDAATCERLGAPGIEQALSAASREAFGAPQFVHFDPAPRSGG*