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cn_combo_scaffold_52_19

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: comp(19527..20840)

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Variovorax paradoxus RepID=UPI0003634924 similarity UNIREF
DB: UNIREF100
  • Identity: 93.1
  • Coverage: 437.0
  • Bit_score: 800
  • Evalue 6.10e-229
Variovorax paradoxus strain MEDvA23 contig_49, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ28214.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona similarity UNIPROT
DB: UniProtKB
  • Identity: 94.7
  • Coverage: 432.0
  • Bit_score: 798
  • Evalue 4.30e-228
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 93.1
  • Coverage: 435.0
  • Bit_score: 789
  • Evalue 6.80e-226

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1314
ATGGATGTCTTCCTGCTGGCCTTGCTGACGACGCTCAACGCGGCGTTCGCAATGTCCGAAATGGCCCTTTCCACCAGCCGCCGCGCACGTCTCGCGGCCTTGGCCGAAACGGGAGACGCCGGCGCCGAGGCGGCGCTCAAGCTGATGGAGTCGCCGACGCAGTTCCTGTCCACGGTGCAGATCGGCATCACCTCCATCGGCATGCTGAGCGGCATCGTCGGCGAGGCCGCCTTCGCGGCGCCGCTGGCGGTGTGGATGGAATCGGTCGGCATGGGCGCCGGCACCGCCAGCGTGGTGTCGACCGCGGCGGTGGTCACCTGCATCACCTTCTTCACCATCATCTTCGGCGAGCTGGTGCCCAAGCGCATCGGCCAGCTCTACCCCGAGCCGGTGGCGCGTTTCGTGGCGCGCCCCATGCGCGGGCTGGCCAAGGCGGCCAAGCCCTTCGTGTGGTTGCTGGCCGGCGCCACCGCCGCCACGCTGAAGCTGCTGCGCATCGACGCCAACGCGGCCCGTTCGGTCACCGAAGAGGAAATCTCGGCCAGCCTCGAAGAAGGCGTGGACGCCGGCGTCATCGAGCAGCACGAGCACCAGATGGTGCGCAATGTGTTTCACCTCGATGACAGACGCCTGTCGTCGCTCATGATCCCGCGCGCCGACATCGAATGGCTCGACGCCTCGTTCACCGTGCGGCAGGCGCTGCAGAAGGTGGCCGACGCGGCTGCGCTCAACCTCGTGCACTCCTGGTATCCGGTGTGCCGCAACTCGCTCGACGACGTGGTCGGCGTGATCAGCGTGGCGCACCTGCTGCGCCTGGGCGCCGCGCACACCGGCGTGCTGGGCCAGGAAGCCACGCCCGCGGTGTTCGTACCCGAGACCCTCACCGGCATGGAGCTGCTCGAGCAGTTCCGCGCCCGCGCCGGCCGCCTGGTGTTCGTGGTCGACGAATATGGCGTGGTGCAAGGCCTCATGACCCCGCGCGACCTGCTCGAAGCCATTGCCGGCGAGCTTCAGCCCGGCATGCAGACCGACGCCTGGGCGCGCGAGCGGCCCGACGGCGTGTGGGAACTCGATGGCCTCATGCCGGTGTCAGAGCTGCGCGCGCGCCTGGGCATCCGCGAGCTGCCCGATGAGGAGCGCGGCCGCTATAACACCGTGGCGGGCCTGCTCATGGCCGTGTCCGGCCACCTGCCGGAGGTCGGCGAGCACATCGATTGCGCCGGCTGGTGCTTCGAGATCGTGGCGCTCGAGGGCCGCCGCATCGACCGCGTGCTGGCATCGCCCGATCCGGCGGCCGCTCCAGAGACCGACTAG
PROTEIN sequence
Length: 438
MDVFLLALLTTLNAAFAMSEMALSTSRRARLAALAETGDAGAEAALKLMESPTQFLSTVQIGITSIGMLSGIVGEAAFAAPLAVWMESVGMGAGTASVVSTAAVVTCITFFTIIFGELVPKRIGQLYPEPVARFVARPMRGLAKAAKPFVWLLAGATAATLKLLRIDANAARSVTEEEISASLEEGVDAGVIEQHEHQMVRNVFHLDDRRLSSLMIPRADIEWLDASFTVRQALQKVADAAALNLVHSWYPVCRNSLDDVVGVISVAHLLRLGAAHTGVLGQEATPAVFVPETLTGMELLEQFRARAGRLVFVVDEYGVVQGLMTPRDLLEAIAGELQPGMQTDAWARERPDGVWELDGLMPVSELRARLGIRELPDEERGRYNTVAGLLMAVSGHLPEVGEHIDCAGWCFEIVALEGRRIDRVLASPDPAAAPETD*