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cn_combo_scaffold_52_22

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: 22555..24036

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator with HTH domain and aminotransferase domain containing protein n=1 Tax=Variovorax sp. CF313 RepID=J2JXJ3_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 87.8
  • Coverage: 493.0
  • Bit_score: 865
  • Evalue 2.30e-248
Transcriptional regulator with HTH domain and aminotransferase domain containing protein {ECO:0000313|EMBL:EJL72575.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderi similarity UNIPROT
DB: UniProtKB
  • Identity: 87.8
  • Coverage: 493.0
  • Bit_score: 865
  • Evalue 3.20e-248
GntR family transcriptional regulator with aminotransferase domain similarity KEGG
DB: KEGG
  • Identity: 81.2
  • Coverage: 490.0
  • Bit_score: 817
  • Evalue 2.60e-234

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1482
ATGGTGCCACGCCCTTCTCTTTCCCCTGCTGCGCTGCTCGAATCCCCGCTCACCAGGGACCGCGAAGCGGGGTCGATGCAGCGCCAGTTGCATGACCGGCTCAAGCGCGCCATCCTCGACGGCAGCCTCGCGCCCGGCAGCCGGCTCCCGGGCTCGCGCGCACTGGCCGAATCGCTCGAAATATCGCGCAACACCGTCACCGCGACCTACGAGCATCTGGCCGCCGAAGGCTACGTGCAGCCCGACCGCCAGGGCACGCGCGTGACCGAACTCTCGTCGCCCACCCTGCCGCCCCAGCGCGCAGGCAAGGCCACCGCCGTGCCGGACACCGCGCGGCGCCTGTCGAAGATCAAGCCTGCCGTATCGCGCGCCGAAACGGACGTGGCACTGCGCCCCGGCGTGCCCGCGCTGTCGCACTTTCCGGCGGCCGCGTGGCGGCGCTCGCTCGACCGTGCGATCCGCGGCGCCGGCCCGGCCGCGCTGGGCTATGGCGACCCGCTGGGCGAGCCGCCGCTGCGCGCGGCCATCGCGCGGCACCTGTCGGTCGCGCGCGGCGTGCGCTGCGAGCCGCACCAGGTGGTCATCGCCGAAGGTGCGCAGGAAGCCATATCGCTGTGCGTGCGGCTCCTGTCGAACCCCGGCGAGACCGGCTGGGTCGAAGACCCGGGCTATCGCGGCGTGAAAGCCGCCATGCATGCGGGCGACATGCGCATCGTGCCGTTGCGGGTCGACGCCGAGGGCCTGTGCGTGAGCGAGCGTGACTGGCAGAAACACCCGCCCCGGCTGATCTACACCACGCCTTCGCACCAGTACCCTGGCGGCGCGGTGCTCGGCATCGCGCGCCGGCTCGCGCTGATCGCGCAGGCGCGCCAGCACGGCGCCTGGATCATCGAGGACGACTACGACAGCGAATTCCGCCACACCGGAGAGCCCATCGGCGCCATGCAGGGGCTGGTGGACGAGGCGCCCGTGCTCTACATCGGCACCTTCAGCAAGACCATGTTCCCGTCGCTGCGACTCGGCTTCCTGGTGGTGCCGACACAACTGCTGCCGGTCGTGCAGGCGCCCCTGGAGGAAATGCTGCGCGGTGGCCACCGCCACGAGCAACTGGCCATGGCCGACTTCATCGAAAGCGGTCAGTTCAGCCGGCACCTGGGCCGCATGCGCCGGCTGTATCGCGACAGGCAGCAGGCCCTGCGACTCGCACTGCAAAAGCACCTGAAGGTGCCGCATGAGATCGAGGGCGGCTACTGCGGCCTGCACCTCACGGTGCGGCTGCCGGCGCGCTTCGACGACCGCAGGATCGCCGCAGAGGCACTGCGGCACCGCATCGCGCCCTCCCCGCTGTCGGCCTTTGCCATGCAGCCGCAGCCGTCGGACAACGGGCTGGTGCTGGGGTATGGCAATACGCCGGCGGAATTGCTCGAGCCGCTGGTCAAGAGGTTGTCGTTGCTGGTGCGGGAGGCCTCGCGCGACTGTTAG
PROTEIN sequence
Length: 494
MVPRPSLSPAALLESPLTRDREAGSMQRQLHDRLKRAILDGSLAPGSRLPGSRALAESLEISRNTVTATYEHLAAEGYVQPDRQGTRVTELSSPTLPPQRAGKATAVPDTARRLSKIKPAVSRAETDVALRPGVPALSHFPAAAWRRSLDRAIRGAGPAALGYGDPLGEPPLRAAIARHLSVARGVRCEPHQVVIAEGAQEAISLCVRLLSNPGETGWVEDPGYRGVKAAMHAGDMRIVPLRVDAEGLCVSERDWQKHPPRLIYTTPSHQYPGGAVLGIARRLALIAQARQHGAWIIEDDYDSEFRHTGEPIGAMQGLVDEAPVLYIGTFSKTMFPSLRLGFLVVPTQLLPVVQAPLEEMLRGGHRHEQLAMADFIESGQFSRHLGRMRRLYRDRQQALRLALQKHLKVPHEIEGGYCGLHLTVRLPARFDDRRIAAEALRHRIAPSPLSAFAMQPQPSDNGLVLGYGNTPAELLEPLVKRLSLLVREASRDC*