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cn_combo_scaffold_52_25

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: comp(37059..38543)

Top 3 Functional Annotations

Value Algorithm Source
hemolysin activation protein n=1 Tax=Acidovorax avenae RepID=UPI0002EC68CB similarity UNIREF
DB: UNIREF100
  • Identity: 67.3
  • Coverage: 505.0
  • Bit_score: 640
  • Evalue 1.60e-180
HlyD family type I secretion membrane fusion protein similarity KEGG
DB: KEGG
  • Identity: 67.5
  • Coverage: 502.0
  • Bit_score: 637
  • Evalue 2.90e-180
Type I secretion membrane fusion protein, HlyD family {ECO:0000313|EMBL:ADX45953.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.5
  • Coverage: 502.0
  • Bit_score: 637
  • Evalue 1.40e-179

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Taxonomy

Acidovorax avenae → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1485
ATGACGCCAGAGGTTTCCACCACTGCCCCTGCGGCCAACGCGCCGCACGCGCGCAACATGCGGCACCCCGCCTTCGAGCTGCTGGGGCGCTACAAGGCCGTCTTCAAGGCCGCCTGGAAGCATCGCCACGAACTGGCCGGCCCCAGGCGCTTGTCCGATGAAGCAGCGTTCCTGCCCGCAGCACTCAGCTTGCAAGACACCCCCGTTCACCCCGCACCCAGGCGACTGGCCTATGCGCTGATTGCCCTGTTCCTCATTGCGTTGACGTGGTCCATCTTTGGGCAGATCGACATCGTGGCTGTAGCGCCCGGCAAGATCATCGTGAGCGAGCGCACCAAGATCATCCAACCACTGGAGGTGAGCGTGGTCAAGCGCGTGCTGGTCAGGGATGGCGACCATGTCGAAGCGGGCCAGCCGCTGGTCGAACTCGACCCCACCACTGCGAACGCCGACAAGACCAGCATTGACGAACAGCTGAAGTCCGTGCAATCCGAGGTGCTGCGCACACGCGCGCTGCAACAGGCGCTCAACGCGACAACCGCTTCCCGCGCACCCGAGCTTGGCAAGAACATCCCCGGCAGCTGGTCGGAGGTCGACATCGACGCCGCCAGAGCGCAATTGAGCGACGAGTGGAGCGACATCACAGCCAAGCTGGCCAAAGCGTCCGCAGAGATCAACCGTCGCCAGGCCGAGATCGCCACGGTGCGCGAGATGGTCGCCAAGCTGGAGACCACGGTGCCGATTGCCAGGCAAAGAGAGGCCGACTTCCATCAACTGGCCAACCAAGGCTTCATGTCGAGTCATGCGAACCAGGACCGCACGAGGGAGCGCATCGAGCTGGAGCGCGACCTCGCGACACAACGGGCACGGCTGGCCGAGGCCAATGCCACGCTGAGGGAGAGCGAGAACACGAGGGCTGCCTACATCGCCGAGACCAAGCACAGCCTGAGAACGCGGGAAGCGGCGGCCGAGCTCAAGCGCCAGCAGGGCACGCAGGATCTGGCCAAGGCCGGTCAGCGTGAACGCTTGACGACGCTCAAGGCGCCGGTGGCCGGCACAGTGCAGCAATTGGCCGCACACACCGAAGGCGGTGTAGTCACGGAGGCTCAGCCCCTGATGGTGATCGTGCCCGATGGGGCGCAGGTCACGGCCGAAGTGACGCTGGACAACAAGGACATCGGCTTCGTGAGCCCGATGCAGGAAGCGGCGATCAAGCTGGAGACGTTCCCGTACACGCGCTACGGGACGGTGAACGCGACCGTGAAGACGGTGACCGCAGATGCCGTGAATGACGAGAAGCGCGGGGCGATCTTCCCGGTGACGCTGAACCTCAACGACACGACCATCGATGTGGATGAAAAACCTATCAAGCTGAGCCCGGGCATGAATCTCACGGCGGAGATCAAGACAGGCAAGCGAAGAGTTATTGAATTCCTGCTCAGCCCCGTCCAGAGGGCGAGCGGTGAAAGCATGAGGGAGCGATGA
PROTEIN sequence
Length: 495
MTPEVSTTAPAANAPHARNMRHPAFELLGRYKAVFKAAWKHRHELAGPRRLSDEAAFLPAALSLQDTPVHPAPRRLAYALIALFLIALTWSIFGQIDIVAVAPGKIIVSERTKIIQPLEVSVVKRVLVRDGDHVEAGQPLVELDPTTANADKTSIDEQLKSVQSEVLRTRALQQALNATTASRAPELGKNIPGSWSEVDIDAARAQLSDEWSDITAKLAKASAEINRRQAEIATVREMVAKLETTVPIARQREADFHQLANQGFMSSHANQDRTRERIELERDLATQRARLAEANATLRESENTRAAYIAETKHSLRTREAAAELKRQQGTQDLAKAGQRERLTTLKAPVAGTVQQLAAHTEGGVVTEAQPLMVIVPDGAQVTAEVTLDNKDIGFVSPMQEAAIKLETFPYTRYGTVNATVKTVTADAVNDEKRGAIFPVTLNLNDTTIDVDEKPIKLSPGMNLTAEIKTGKRRVIEFLLSPVQRASGESMRER*