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cn_combo_scaffold_52_26

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: comp(38540..40783)

Top 3 Functional Annotations

Value Algorithm Source
type I secretion system ATPase (EC:3.6.3.43); K11004 ATP-binding cassette, subfamily B, bacterial HlyB/CyaB Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 79.7
  • Coverage: 733.0
  • Bit_score: 1140
  • Evalue 0.0
type I secretion system ATPase (EC:3.6.3.43) similarity KEGG
DB: KEGG
  • Identity: 79.4
  • Coverage: 742.0
  • Bit_score: 1138
  • Evalue 0.0
Type I secretion system ATPase n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q9N7_ACIAP similarity UNIREF
DB: UNIREF100
  • Identity: 79.4
  • Coverage: 742.0
  • Bit_score: 1138
  • Evalue 0.0

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Taxonomy

RLO_Burkholderiales_61_40 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2244
ATGGGAATAGGGGAGGGAGTCGTGCAACAGCACGGGGTGGAGCGCGCGCGCCCGCAAGAAGCACCTGACGCGGGGGCTCCTTCGCTCATCGCGCTGTGCACGATTGCACGCTTCCACCAGATTGCAGCCGATGCGTCGCTGCTGTCTCATCAACTGGGCCTTGCCTCTTCCGAGCCCATCAACACCGCCACGCTGCTGGGCGCAGCCAAGCATCTGGGCCTGAAGGCCAAGTCCTCCCGCACGACGCTGGATCGCCTGTCCCTGACACCGCTGCCCGCATTGGCAGTTTTGCGTGACGAGTCCGGCCAGGAACGATTCGTCATCCTTGCCCAGTGCGATGCCCAACGCGTCCTGCTGCAAGACCCCTCTTCCTCGAACGGCCGCCCCGTCATCGAACCCCTGGAAGTCTTCGCCGCACACTGGACGGGCGAACTCATCCTCATCACCAGCCGCGCCAGCCTTGCAGGCGACCTCGCCAAGTTCGACTTCTCCTGGTTCATCCCCAGCCTCGTCAAGCACAGGAAGCTGCTCGGTGAAGTCCTCTTCATCTCCTTCATCCTGCAACTGTTCGCGCTGGTCAGCCCGCTGTTCTTCCAGGTCGTGATGGACAAGGTGCTCGTGCACCGCGGCCTGACCACGCTGGATGTGCTCGTCATCGGCCTGCTGGTCGTTGTTGTCTTCGAGTCATTACTCAACGGCTTGCGCAGCTACGTCTTCAGCCACACCACGAACCGCATCGACGTCGAACTCGGCGCACGGCTGTTCCGCCACCTCGTGCAATTGCCCCTGGCCTACTTCCAGGCCCGGCGCGTCGGCGATTCCGTTGCCCGCGTGCGCGAGTTGGAGAACATCCGCAGCTTCCTGACCGGCAATGCCCTGACGGTGCTGCTGGACGTCGTCTTCTCCATCGTCTTCGTGGCCGTCATGCTGTTCTACAGCGTGCCCCTGACCTTGATCGTGCTGGCCAGCATGCCACTGTACTTCGGCCTGAGCCTGGCGGTGGTGCCGATCCTGCGCAGCCGCCTGGACGAGAAGTTCGCGCGCGGCGCGGAGAACCAGGCCATGCTGGTGGAGACCGTCAGCGCCATCCAGACCGTCAAGGCCACCGCGCTCGAACCGGCCTTCGGGCGCCGTTGGGACAACCAACTGGCCGCCTACATCTCCGCCAGTTTCCGAACCCAGAACCTCGCGAGCTGGGCCAACGAAGGCGTCAACCTTATCGGCAAACTAGTCAACGCAGCCACCCTCTGGTACGGCGCGCACCTCGTGATGAACAACGACCTGACGGTCGGCCAGTTCGTCGCCTTCAACATGTTCGCCCAGCGCGTGTCGCAGCCCATCATGCGCATGGCCCAGCTGTGGACCGACTTCCAGCAGACCGGCATCTCCATGGCCCGGCTCGGGGACATCCTCAACACCCGCACCGAGGTGCCGCCGAGCACCGCTGCGCAGCTCCCAGCGCTCAAGGGTCGCGTAACCCTGGACAACCTGACCTTCCGCTACCGCCCCGAAGCGGCACCTGTGCTCAACGGCGTCAGCCTGGACGTGCGCCCCGGCGAAGTCATCGGCATCGTCGGGCGCTCAGGCTCCGGCAAGAGCACGCTGACCAAGCTCATCCAGCGCCTGTATGCCCCCGAGCAGGGACGCTTGCTGGTCGACGGCATCGACATCAGCCTCATCGACGCGGCACAACTGAGAATGCAAGTGGGCGTGGTCTTGCAGGAGAACACCCTCTTCAACCGCAGCGTGCGCGAGAACATCGCCATCGTCGATCCGGCCGCACCGCTCGAAGCCATCATTCATGCAGCCCAACTGGCCGGCGCCCATGAATTCATCAGCGAGCTGCCCGAGGGCTACGACACCATGGTGGGCGAGCAGGGAGCCAGCCTTTCCGGAGGCCAGCGCCAGCGCATCGCCATCGCCAGAGCCCTGTTCACCCACCCGCGCGTCCTGATCTTCGACGAGGCCACCAGCGCACTGGACTACGAGAGCGAGGCCATCGTGCAGCGCAACATGGCGCACATCTGCAGGGGGCGCACCGTCTTCATCATTGCCCACCGCCTCTCCGCCGTGCGGCACGCCAACCGCATCATCGTGATGGACAAGGGAAAGATTGTCGAAGGAGGCACCCACGAGAGCCTGCTGGCCCGGCCCAAGGGCATCTATGCGCACCTGTGGAACATGCAAGGCGGTGGGCATCCGACAGAGACGAGTGACGGGGCTGGATCGGGAGCACCAGCATGA
PROTEIN sequence
Length: 748
MGIGEGVVQQHGVERARPQEAPDAGAPSLIALCTIARFHQIAADASLLSHQLGLASSEPINTATLLGAAKHLGLKAKSSRTTLDRLSLTPLPALAVLRDESGQERFVILAQCDAQRVLLQDPSSSNGRPVIEPLEVFAAHWTGELILITSRASLAGDLAKFDFSWFIPSLVKHRKLLGEVLFISFILQLFALVSPLFFQVVMDKVLVHRGLTTLDVLVIGLLVVVVFESLLNGLRSYVFSHTTNRIDVELGARLFRHLVQLPLAYFQARRVGDSVARVRELENIRSFLTGNALTVLLDVVFSIVFVAVMLFYSVPLTLIVLASMPLYFGLSLAVVPILRSRLDEKFARGAENQAMLVETVSAIQTVKATALEPAFGRRWDNQLAAYISASFRTQNLASWANEGVNLIGKLVNAATLWYGAHLVMNNDLTVGQFVAFNMFAQRVSQPIMRMAQLWTDFQQTGISMARLGDILNTRTEVPPSTAAQLPALKGRVTLDNLTFRYRPEAAPVLNGVSLDVRPGEVIGIVGRSGSGKSTLTKLIQRLYAPEQGRLLVDGIDISLIDAAQLRMQVGVVLQENTLFNRSVRENIAIVDPAAPLEAIIHAAQLAGAHEFISELPEGYDTMVGEQGASLSGGQRQRIAIARALFTHPRVLIFDEATSALDYESEAIVQRNMAHICRGRTVFIIAHRLSAVRHANRIIVMDKGKIVEGGTHESLLARPKGIYAHLWNMQGGGHPTETSDGAGSGAPA*