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cn_combo_scaffold_52_27

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: comp(41040..41957)

Top 3 Functional Annotations

Value Algorithm Source
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain n=1 Tax=Variovorax sp. CF313 RepID=J2KAT3_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 94.8
  • Coverage: 306.0
  • Bit_score: 581
  • Evalue 7.00e-163
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain {ECO:0000313|EMBL:EJL70298.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderi similarity UNIPROT
DB: UniProtKB
  • Identity: 94.8
  • Coverage: 306.0
  • Bit_score: 581
  • Evalue 9.80e-163
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 65.3
  • Coverage: 300.0
  • Bit_score: 395
  • Evalue 1.20e-107

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 918
ATGCGCCCCTCTCATTCCACGTCCGTCCGCACCTACGGCATGCACGAGCGTGCCGACCACCTCGACTTCGACATCCGCTTCCAGGGCGCGCGCAACGAACTCACGCTGCCGCACCGGCATGCGTACTTCCAGATCCAGATCGGCATCGAAGGGCACTCTCAGCAAGCCATCGGCGGCGAGGTGCGTCCCTTCGGCCCGCGCCACCTGAGCTTCGTGCTGCCGTACCGGGTGCACGTGATTCCGCACCCGCCCGAGGCGCTGTACTGCATCGTCAACTTCGACCAGCGCTTCCTGTGGCCCGAACTCGACGTCGACGCGCTCGACCTGGATGACGTGCCGCTCGCACGCTACCCCGACCTTGCACCCTTCCTGTTCCAGGAGTACGTCGACTTCGCCTTCGACGAGGCCGACTTCGCGCGCGTTCGCGGCTGGCTCGATGAGTTGCATGCACTGAACGCGGGCCGCAGCTTCGGCGCCAAGATCGCCATGCGCGGCATCGTGCAGCAGATCATCGCCCTGGCCTGCATGCGGCAGGAGCAGGCGCTGATGCGGCTCTCGCTGCAGCACAACGGCAAGACCTCGCAGCACGACGCGTTGCAGCGCGTGGTGCGCTATGTGCGCGACAACCTCGACAAGCCCTTGTCGCTCACCGATGCCGCCGCGGCCGCGTTCCTGTCGCCCAACTATCTCGCCAACCTGCTGCGCAAGGAAACCGACCGCACCTTCACCGACCTCGTGACCGAGCGGCGCATCGAGCGCGCGAAGGAATTGCTGTCGTCCACGTCGCTGCTGGTGCGGGACATCGCGCACCAGTGCGGGTTCGCGGACGAGGCGTATTTCAATCGGCGCTTCCGGCAGTGGGTGGGGAGCACGCCGCGCAGTTTTCGGCGTGAGCATATGGCTAACGCGAGAGGGTAG
PROTEIN sequence
Length: 306
MRPSHSTSVRTYGMHERADHLDFDIRFQGARNELTLPHRHAYFQIQIGIEGHSQQAIGGEVRPFGPRHLSFVLPYRVHVIPHPPEALYCIVNFDQRFLWPELDVDALDLDDVPLARYPDLAPFLFQEYVDFAFDEADFARVRGWLDELHALNAGRSFGAKIAMRGIVQQIIALACMRQEQALMRLSLQHNGKTSQHDALQRVVRYVRDNLDKPLSLTDAAAAAFLSPNYLANLLRKETDRTFTDLVTERRIERAKELLSSTSLLVRDIAHQCGFADEAYFNRRFRQWVGSTPRSFRREHMANARG*