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cn_combo_scaffold_52_28

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: comp(42043..42732)

Top 3 Functional Annotations

Value Algorithm Source
5-carboxymethyl-2-hydroxymuconate isomerase n=1 Tax=Variovorax paradoxus RepID=UPI000368C2A7 similarity UNIREF
DB: UNIREF100
  • Identity: 93.9
  • Coverage: 229.0
  • Bit_score: 445
  • Evalue 3.40e-122
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase {ECO:0000313|EMBL:EJL70299.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadac similarity UNIPROT
DB: UniProtKB
  • Identity: 93.9
  • Coverage: 228.0
  • Bit_score: 438
  • Evalue 7.70e-120
fumarylacetoacetate (FAA) hydrolase similarity KEGG
DB: KEGG
  • Identity: 68.9
  • Coverage: 228.0
  • Bit_score: 342
  • Evalue 1.20e-91

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 690
ATGACTTCCTATGCCATTTCCCCAGCACCCGTCCATTCCCTGCCCATCCAGGGCGAATCGGCGCGCTTTCCCGTCAACCGCATCTTCTGCGTGGGCCGCAACTACTCCGAGCATGCCCGCGAGATGGGCCACAACCCCGACCGCGAACCCCCGTTCTTCTTCATGAAGCCGGCCAATGCCATCGTCGCGGACGGCGGCGAGTTTGCCTATCCCACGCTGTCGAACGATGTGCACCACGAAATCGAGCTCGTCGTCGCGCTCAAGACCGGCGGCTCGAACATCGCTGCTTCCGACGCCCTGTCCCACGTGTACGGCTACGCCGTCGGCCTCGACATGACCCGCCGCGACCTGCAGTCCGAAGCCAAGAAAATGGGCCGCCCCTGGGACACCGGCAAGGCCTTCGACGGCTCCGCCCCCTGTGGCGAACTGGTGCCCGTGGCCAAGGCAGGCCACCCCGCGGCAGGCGAGATCCGCCTCGAAGTCAACGGCGCGCAACGCCAGGTCGGCGACCTGGGCGACATGATCTGGAACGTGCCCGACACCATCGCCTACCTCTCGACCCTGTTCACCCTCCAGCCCGGCGACCTGATCTTCACCGGCACCCCCGCCGGCGTGGCGGCCGTGCAGCGCGGCGACCGCATGCGCGGCACCGTGGCGGGCGTCGGCGCACTGGAAGTCGTGGTCGTCTGA
PROTEIN sequence
Length: 230
MTSYAISPAPVHSLPIQGESARFPVNRIFCVGRNYSEHAREMGHNPDREPPFFFMKPANAIVADGGEFAYPTLSNDVHHEIELVVALKTGGSNIAASDALSHVYGYAVGLDMTRRDLQSEAKKMGRPWDTGKAFDGSAPCGELVPVAKAGHPAAGEIRLEVNGAQRQVGDLGDMIWNVPDTIAYLSTLFTLQPGDLIFTGTPAGVAAVQRGDRMRGTVAGVGALEVVVV*