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cn_combo_scaffold_52_29

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: comp(42833..43813)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter, substrate-binding protein, aliphatic sulfonates family n=1 Tax=Variovorax sp. CF313 RepID=J2JR56_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 91.3
  • Coverage: 323.0
  • Bit_score: 574
  • Evalue 7.00e-161
ABC transporter, substrate-binding protein, aliphatic sulfonates family {ECO:0000313|EMBL:EJL70300.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholde similarity UNIPROT
DB: UniProtKB
  • Identity: 91.3
  • Coverage: 323.0
  • Bit_score: 574
  • Evalue 9.80e-161
aliphatic sulfonates family ABC transporter periplsmic ligand-binding protein similarity KEGG
DB: KEGG
  • Identity: 89.3
  • Coverage: 317.0
  • Bit_score: 557
  • Evalue 2.50e-156

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 981
ATGAGCAACAACCGCACAGCCATGACCGTCCACAGTTCACGCCGCCAGTTTCTTGTTCAGGGGGCGTCGGTGGCTGCCGCCATCGCCGCAGCACCCGCCCTTGTTTCCGCACAGGGCCGGCCGGTGCTCAAGGCGGGTGACCAAAAGGGCGGCTTGCTCGCATTGCTCGAAGCGGCGGGTGGGCTCGAGGGGCTCGGCTACGACATCCAGTGGTCGGAGTTCCCGGCCGCCGCGCCGCTGGCCGAAGCGCTGAACGCGGCCGCGGTCGACTCCGGCCCCATCGGCGACGCACCGCTGATCTTCGCGTTGGCCGCCGGCACGCGCGTGAAGGCCATCGGCGCCAACCGCTCCGACTCCTACGGCACGGCGGTGCTGGTGCGGCCCGATTCGCCGCTGAAGGCGGCCGGCGATCTCAGGGGCAAGAGCGTCGCCACCAACCGTGGTTCCATCGGCCACTATGTCACGCTCAAGGCCATCACCGCGGCCGGCCTGAAGCCGGAGGACGTGAACATCCGCTTTCTTGCGCCCGCCGACGCCAAGCTTGCGCTCACGCAGGGTTCGGTCGACGCCTGGGCCACGTGGGAGCCGTATACGGCGCTGGCCGAGGTCAGCAATCATGCGCGGGTGCTGGTCAGCGGCCGCGGACTGCTGCCGGGCCTGAGCTACCTCGCGGCCACCGACAGCGCGATCGCGGCCAAGCGTCCGGTGCTGCAGGACTTTCTGCAGCGCGTGGTGAAGGCACAGCTGTGGTCGTACCGCAATGTCGACGCGTACTCGGCCGCGCTGGCACGGATCATCGGCATACCGCCCGAGGCGGCGAAGCTGCAGTTCGAGCGGCGGCAGCAGAAGTGGGTGGCCATCGATGCGCAAGTGATCTCGGACCAGCAGGGGACGGCGGACTTTTACCGGCAGGTGGGGCTCATCAAGCAGCCGCTGGATGTCAAAGGGACTTTCGATACCGCGTTCGGCGTGGCTGGCTGA
PROTEIN sequence
Length: 327
MSNNRTAMTVHSSRRQFLVQGASVAAAIAAAPALVSAQGRPVLKAGDQKGGLLALLEAAGGLEGLGYDIQWSEFPAAAPLAEALNAAAVDSGPIGDAPLIFALAAGTRVKAIGANRSDSYGTAVLVRPDSPLKAAGDLRGKSVATNRGSIGHYVTLKAITAAGLKPEDVNIRFLAPADAKLALTQGSVDAWATWEPYTALAEVSNHARVLVSGRGLLPGLSYLAATDSAIAAKRPVLQDFLQRVVKAQLWSYRNVDAYSAALARIIGIPPEAAKLQFERRQQKWVAIDAQVISDQQGTADFYRQVGLIKQPLDVKGTFDTAFGVAG*