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cn_combo_scaffold_52_30

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: comp(43810..44817)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter substrate-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI0003714C46 similarity UNIREF
DB: UNIREF100
  • Identity: 91.0
  • Coverage: 332.0
  • Bit_score: 606
  • Evalue 1.70e-170
putative ABC transporter, substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 90.9
  • Coverage: 329.0
  • Bit_score: 601
  • Evalue 1.20e-169
Putative ABC transporter, substrate-binding protein {ECO:0000313|EMBL:AGU51064.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" s similarity UNIPROT
DB: UniProtKB
  • Identity: 90.9
  • Coverage: 329.0
  • Bit_score: 601
  • Evalue 5.90e-169

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1008
GTGAAGACGAACGCAAGCCTTTCCCGCCGCGGCGTGCTGCGCGCCGGCGGCGCGGCCGCTGTGCTTGCCTCCGGCGGCCTGATCGCCTCGCAGGCCTTCTCGCAGTCCTCGCGCAAGCTCACCTTCGCATGGAATGCCGCCGCGTTCTGCCTGTCGCCCGTGGTGGTGGCGCAGGAGCGCGGCTACTTCGAGCGCAACGGCCTGCAGGTCGAGCTCATCAACTACACCGGCTCGACCGACCAGCTGCTGGAGTCGTTGGCCACGGCAAAGGCCGACGCGGCCGTCGGCATGATCCACCGCTGGCTCAAGCCGCTCGAGGCGGGCTTCGACGTGAAGATCGTCGGCAGCTCGCACGGCGGCTGCGTGCGGCTGGTGGGCGCGAAGAGCGCGGGCGTCAGCGACCTGGCGAGTCTCAAGGGCAAGGTGATCGGCGTGTCCGACATCGCAAGCCCCGGCAAGAACTTCTTTTCGATCCTGCTCGCGAAGAACGGCATCGACGCCGACAAGGACGTCACCTGGCGCCAGTACCCGGCCGACCTGCTCGACGTGGCGGTGAAGAAGGGCGAGATCCAGGCCATCGCCGACGGCGACCCCAACGTCTACCTGATCGAGAAGCGCAACCAGGGCGCCTACGTCGAGTTGGCGAGCAATCTCTCGGGCGAATACAAGGACAAGGTGTGCTGCATCGTCGGCGCGCGCGGCGAGCTCGTGCGCAAGGACAAGGCCACCGTCGCCGCATTGGTGCGCGCCATTGCGCAAGCTTCCAGCTACGTGGCCGAGAACCCGAACGAATCGGCCAGGCTTTTCGCCAAGTATTCGCCCAACGTGGCGGTGGAAGACCTGCGCGCGCTGCTGGGAACGCTCACGCACCAGCACCATCCGCTGGGCCGCGCGCTGCGCGACGAAGTCGAGTTCTACGCGCGCGACTTCCGAGGCGTGGGCGTGCTCAAGAAGAGCACCGACCCGGCGCGCTTTGCCGACCATGTTTCCTTCGACCCGCTCGCATGA
PROTEIN sequence
Length: 336
VKTNASLSRRGVLRAGGAAAVLASGGLIASQAFSQSSRKLTFAWNAAAFCLSPVVVAQERGYFERNGLQVELINYTGSTDQLLESLATAKADAAVGMIHRWLKPLEAGFDVKIVGSSHGGCVRLVGAKSAGVSDLASLKGKVIGVSDIASPGKNFFSILLAKNGIDADKDVTWRQYPADLLDVAVKKGEIQAIADGDPNVYLIEKRNQGAYVELASNLSGEYKDKVCCIVGARGELVRKDKATVAALVRAIAQASSYVAENPNESARLFAKYSPNVAVEDLRALLGTLTHQHHPLGRALRDEVEFYARDFRGVGVLKKSTDPARFADHVSFDPLA*