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cn_combo_scaffold_120_2

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: comp(153..1154)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter substrate-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI000364CDE0 similarity UNIREF
DB: UNIREF100
  • Identity: 91.7
  • Coverage: 337.0
  • Bit_score: 602
  • Evalue 1.90e-169
Uncharacterized protein {ECO:0000313|EMBL:EJL70116.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Va similarity UNIPROT
DB: UniProtKB
  • Identity: 90.7
  • Coverage: 332.0
  • Bit_score: 597
  • Evalue 1.10e-167
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 85.0
  • Coverage: 327.0
  • Bit_score: 560
  • Evalue 3.90e-157

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1002
GTGACGAGCTTCCGCCTTCCGACCCGCCGTGCCCTGCTGTGCGCCGCCGCTTCCGTTGCCACGCTGTGCGCGCTGCCCCATGCGCAGGCACAGGGCACCTACCCGAACAAGCCGATCCGCATGGTCGTGCCCTTCGCCGCGGGCGGCGCCACCGACGTGCTGGCGCGCGTGATCGGCCAGAAGATGTCGGCCGGCATGGGCCAGCCCGTGATCATCGACAACAAGCCCGGCGCGGCCGGCATCATCGGCACCGACGCGGTCGTCAAGTCGCCGGCCGACGGCTACACCATCGTGCTGGGCCTGAGCAACTCGCTCATGACCAACGAGTTCCTCTACGAGAAGCTGCCCTACGACACGCAGCGCGACCTCACGCTGATCTACCAGATCGCGATGGCGCCGCTGGTGCTGGTGGTGCACCCCGGCGTGCCCGCGAAGACCGGCCCGGAGCTGCTGAAGTACGTCGTCGCCAACAAGGGCAAGGTGGCCTACGGTTCGTACGGCGTGGGCGCGTACCCGCACCTGGCCGGCGCGCACATGAGCCTTGCCACGCAGTCCGACATGAACCACGTCGCCTACAAGGGCGAGGCGCCGATGATGCAGGACCTGATCGGCGGCCAGATCCAGATGGCCTACGCCAGCGCGCTGGTGGCCAAGCCGCACATCGACTCCGGAAAGATCCGCGCCATCGGCGTGAGCGGCGAGCGCCGCATGAGCACCCTGCCCGACGTGCCCACCCTGGCCGAGCAAGGCCTGAAGGACGAGGCCTACCGCGTGACCGGCTGGCTCGCCATCGCGGTGCCCGCCAAGACGCCCAAGCCCATCGTGGACCGCATCGCGCAGGAAGTGCGCAAGGCCACGCAGCAGCCCGACGTGCAGCAGCGCGTGGCGGCCATGGGCTTCGAGATCAAGGACAGCTCGCCCGAGCTCTTCGCCACCGCCTACAAGGCCGAGCGCCCGGTTTGGGAGCGCCTCATCAAGCAGTCGGGCGCCAAGCTCGAGTAA
PROTEIN sequence
Length: 334
VTSFRLPTRRALLCAAASVATLCALPHAQAQGTYPNKPIRMVVPFAAGGATDVLARVIGQKMSAGMGQPVIIDNKPGAAGIIGTDAVVKSPADGYTIVLGLSNSLMTNEFLYEKLPYDTQRDLTLIYQIAMAPLVLVVHPGVPAKTGPELLKYVVANKGKVAYGSYGVGAYPHLAGAHMSLATQSDMNHVAYKGEAPMMQDLIGGQIQMAYASALVAKPHIDSGKIRAIGVSGERRMSTLPDVPTLAEQGLKDEAYRVTGWLAIAVPAKTPKPIVDRIAQEVRKATQQPDVQQRVAAMGFEIKDSSPELFATAYKAERPVWERLIKQSGAKLE*