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cn_combo_scaffold_120_3

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: comp(1190..3142)

Top 3 Functional Annotations

Value Algorithm Source
AMP-dependent synthetase n=1 Tax=Variovorax paradoxus RepID=UPI000368993B similarity UNIREF
DB: UNIREF100
  • Identity: 93.8
  • Coverage: 647.0
  • Bit_score: 1203
  • Evalue 0.0
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II {ECO:0000313|EMBL:EJL70115.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.0
  • Coverage: 660.0
  • Bit_score: 1170
  • Evalue 0.0
AMP-dependent synthetase and ligase similarity KEGG
DB: KEGG
  • Identity: 89.2
  • Coverage: 648.0
  • Bit_score: 1150
  • Evalue 0.0

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1953
ATGACAGGCAAGCACGAAAACAACTACAGCACCCCGGTCGGCGCGCCGTTCCGCCCCGCCTTTCCCGTCCGCAGCCTCGCGGACATCCGCAAGCTCGAAGAAACGCCACTCGCGCAGGCGCTCACGGTGCGCAGCACCTACGAGATCTTCCGCAACGCCGGCCATGCCTTCGGCGACAAGACGGCGCTGACCTTCCTGCGCACCGGCAACCCGGCCGACGAGCCCATCCGCTGGTCGTATGCCGAACTGCTCGCGCGCCTGCACCAGACGGCGAACATGCTGCACACGCTGGGCGTGGGGCCGCAGGACGCCGTGGCCGTGCTGCTGCCCGGCTGCCTGGAATACCACCTGGCGCTGTGGGGCGGCGAGGCGGCCGGCATCGTGCAGCCGCTGAACCCCCTGCTCACCGACGAGAAGCTGGTGGCGCTGATGACGGCTGCGCGCGCCAAGGTGCTGATCGCCTACGGCTCGGACAGCGAATCGGGCATGTGGTCCAAGGCGATGCGCCTGCGCGGCCAGGTGCCCACGCTCACCACCGTGCTGCGCGTGGCGCCGCATGACGAGGCGCCCGGCGCGGCCGGCCAACTGCCTGAAGGCGTCGCCGAATTCGACGTGCTGCGCGCCGCGCAACCCGACGACCGCCTCGTGAGCGGCCGCGACATCGCGCCTTCGGACATCGCCGCCTACTTCCACACCGGCGGCACCACCGGCGCTCCCAAGCTCGCGCGCCACAGTCACGGCGCGCAGGTGTTCACCGCCTGGGCCAGCGTGCAGGTCGCGGGCATGAACGATCAGGGCATCTCCATCAACGGCTATCCGCTCTTCCACGTGGCGGGCGTGCTGCCGGCTTCGCTCTCTTCGCTGTCGGCGGGCGTGGAGGTGATCATTCCCACCACCTCGCTGCTGCGCAACAAGGAGGTGCTGGCCAACTACTGGAAGCTGGTGGCCCGCTACCGCCCCACCTCGCTGTCGGCCGTGCCCACGGTGCTCGCGGCGCTAGCCAACGTGCCGCTGGACGGCGCGGACATTTCGTCCATCACCTACTGCCGCACCGGCGCCGCCGTGCTCGCGCCCGAGCTGGCCGCGCGCTTCGAGCGGCTCTTCGGCCTGCATGTGCACGAAAGCCTGGGCATGACCGAGATGGCCGGCATCTCGACCATCACCCCGCCGGGCGTGAACGGGCCCGCGGGCTGCGTGGGCTTTCGGCTGCCCTACATGCAGATGCGCGTGGTGGCGCTCGACGAGAACGGCAATGCCAGCGACCGCGAAATGCCGCCCGGCGAACAGGGCATGGTGCTGTTCAAGTCGCCCAACGTGTTCTCCGGCTTCGTGGACCCGGCCGACAACGCCAAGGCCTTCACCGCCGACGGCTGGCTCGCGACCGGCGACCTGGGCTGGATAGACAGCGAAGAGCGGCTCAACCTCACCGGCCGCTCGAAGGACCTGATCATCCGCAGCGGCCACAACATCGACCCCAAGACCATCGAGGACGCGCTGGGCGCCCACCCCGCCGTGCAACTGTGCGCCGCCGTGGGCGCGCCCGATGCCTATGCGGGCGAGCTGCCGGTGATCTTCGCGACGTTGGTGCCCGGCGCATCGGCAACGGAAGAAGAACTGCTGGCCTTCACCGCCGCGCGCGTGGACGAGGCGCCCGCTCGGCCCAAGTGGGTGTCGGTCATCGAGACCATGCCGATGACCAACGTCGGAAAAATCTACAAGCCCGAGCTGCGCGCGATGGCCGCGCAGCGCGTGGTGGCCGCTGCGGTGGCCGAGGCCTGCGCCGCGCTCGGTGTGCCCGAGGCCGCGCGCCCCGCCGTGAAGGCCGAAGGCGAGAGCCTGGTGCGCGTGCTCGTCGACGAAGCCGCCGCCGGCGCGCTTGCCGCGCCGCTGCGCGAGCGGCTGCAGGCGGCGCTGGAGCCGTTGCCCTTCAAGACGCGCATCGCGTCGCAATGA
PROTEIN sequence
Length: 651
MTGKHENNYSTPVGAPFRPAFPVRSLADIRKLEETPLAQALTVRSTYEIFRNAGHAFGDKTALTFLRTGNPADEPIRWSYAELLARLHQTANMLHTLGVGPQDAVAVLLPGCLEYHLALWGGEAAGIVQPLNPLLTDEKLVALMTAARAKVLIAYGSDSESGMWSKAMRLRGQVPTLTTVLRVAPHDEAPGAAGQLPEGVAEFDVLRAAQPDDRLVSGRDIAPSDIAAYFHTGGTTGAPKLARHSHGAQVFTAWASVQVAGMNDQGISINGYPLFHVAGVLPASLSSLSAGVEVIIPTTSLLRNKEVLANYWKLVARYRPTSLSAVPTVLAALANVPLDGADISSITYCRTGAAVLAPELAARFERLFGLHVHESLGMTEMAGISTITPPGVNGPAGCVGFRLPYMQMRVVALDENGNASDREMPPGEQGMVLFKSPNVFSGFVDPADNAKAFTADGWLATGDLGWIDSEERLNLTGRSKDLIIRSGHNIDPKTIEDALGAHPAVQLCAAVGAPDAYAGELPVIFATLVPGASATEEELLAFTAARVDEAPARPKWVSVIETMPMTNVGKIYKPELRAMAAQRVVAAAVAEACAALGVPEAARPAVKAEGESLVRVLVDEAAAGALAAPLRERLQAALEPLPFKTRIASQ*