ggKbase home page

cn_combo_scaffold_120_10

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: comp(9921..12056)

Top 3 Functional Annotations

Value Algorithm Source
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Variovorax paradoxus RepID=UPI000369F3A5 similarity UNIREF
DB: UNIREF100
  • Identity: 95.8
  • Coverage: 712.0
  • Bit_score: 1335
  • Evalue 0.0
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:EJL70108.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp similarity UNIPROT
DB: UniProtKB
  • Identity: 94.8
  • Coverage: 711.0
  • Bit_score: 1325
  • Evalue 0.0
fatty acid oxidation complex, subunit alpha similarity KEGG
DB: KEGG
  • Identity: 94.7
  • Coverage: 711.0
  • Bit_score: 1318
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2136
ATGGCCACCACCACTCCCAGCCCTTCCACGTCCACCGGTCCCGTCACCTTCGAGCGTCGAGGCGACGTCTTCGTGGTGACCATCGACAACCCGCCCGTCAACGCCCTGGGCGTGGACGTGCGCCGCGGTCTCGTGGCCGCCATCGACGCGGCCGAGGCCGACGGCGCCGCCAAGGCGGTGCTGATCGTCGGCGCGGGCCGCAACTTCATCGCGGGCGCCGACATCCGCGAATTCGGCAAGACGCCGCAGCCGCCCTCGCTGCCCGAGGCCTGCCTGAAGATCGAGAACTGCACCAAGCCGGTGGTCGCCGCCATTCACGGCGCCGCGCTCGGCGGCGGGCTGGAGGTGGCGCTGTCGGCCCACTACCGCCTCGCCTCGCCCACCGCCAAGCTAGGCCTGCCCGAAGTGGCGCTGGGCCTCTTGCCCGGCTCGGGCGGCACGCAGCGCGCGCCGCGCCTCATCGGCGTGAAGCCCGCGCTCGAGCTGATGCTCAGCGGCCGCCATGCGGGCGCCAAGGAAGCGCTGTCGCTGGGCCTCGTCGACCGCCTGGGCAACGACGCCGACGCGCTGGCCGAAGGCCTCGCCTATGCGAATGAACTGGTCGCCGCCAAGGCGCCGGTGCGCCGCACCCGCGACGCCGGCGCGCTGGCCGACAAGGAAGCCAGCCGCGCCGCCCTCGAAGCCGCGCGCGCCGACACCGCCAAGAAGAGCCGCGGCCTGTTCTCGCCGATGAAGATCATCGAGGCCGTCGAAGGCGCGCTCACGCTGCCCTTCGACGAAGGCATGGCGCTGGAGCGCAAGCTGTTCCTGCAGTGCATCGACAGCCCGCAGCGCGCCGGCCTGATCCACGCCTTCTTCGCCGAGCGCGAAGTGCTCAAGGCGCCCGAGACCCGTTCGGCCAAGCCGCGCCCGCTGGAGTCGGCCGGCATCGTCGGCGGCGGCACCATGGGCGCGGGCATCGCCGTGGCCATGCTCGACGCCGGCATGCCCGTGACCATGATCGAGCGCGACGACACGCAACTCGCGCGCGGCCGCGCCAACGTCGAGAAGGTGTACGACGGCCTCATCAAGAAGGGCCGCCTGACGCCCGAGGCCAAGGCGGCCGTCATGGCGCGCTTCTCGGGCTCGACCAGCTACGACGCACTCGCCAGCGTCGACATCGTGGTCGAAGCCGTGTTCGAGGAAATGGGCGTCAAGAAGGCCGTGTTCGCCGAACTCGACCGCGTGTGCAAGCGCGGCGCGGTGCTGGCCACCAACACCTCGTACCTGGACATCGACGAGATCGCCGCCAGCATCTCGCGTCCGCAGGACGTGGTGGGCCTGCACTTCTTCTCGCCCGCCAACATCATGAAGCTGCTGGAGATCGTGGTGCCCGCCAAGGTGAGCGCCGACGTGGTCGCCACCGGCTTCGAGCTGGCGAAAAAGCTCAAGAAGGTGCCGGTGCGCGCCGGCGTGTGCGACGGCTTCATCGGCAACCGCATCCTGGCCGTGTACCGCCAGGCCGCCGACCACATGATGGAAGACGGCGCCTCGCCCTACCAGATCGACGAGGCGGTGCGCAACTTCGGCTACCCGATGGGCCCGTTCCAGGTGTCCGACCTGGCCGGCGGCGACATCGGCTGGGCCACGCGCAAGCGCAAGGCCGCCACGCGCGACCCCGAGGCGCGCTACGTGCAGGTGGCCGACCGCATCTGCGAACGCGGCTGGTTCGGCCAGAAGACGCAGCGCGGCTACTACCTGTACCCCGAAGGCGCGCGCACCGGCGTGCCCGACCCCGAGGTGCTGGCCATCATCGACGCCGAGCGCGAGCGCGCCGGCATCAAGCCGCGCGCCTTCACCGAGGAAGAAATCATGCGCCGCTACATGGCCGCGATGATCAACGAAGGCGCCAACGTCGTGCTCCAGCGCATCGCGCTGCGCCCGCTCGACGTGGACGTGACCTTCCTCTACGGCTACGGCTTCCCGCGCCACCGCGGCGGCCCGATGAAGTACGCCGACACCGTGGGCCTGCCCAAGGTGCTGGCCGACATCCAGGAATTCGCGAAGGAAGACCCGATCTTCTGGAAGCCCTCGCCACTGCTGGTGCAGCTGGTCGAGCGCGGCGCCGATTTCGCCAGCCTCAATCAATCCGAGTAA
PROTEIN sequence
Length: 712
MATTTPSPSTSTGPVTFERRGDVFVVTIDNPPVNALGVDVRRGLVAAIDAAEADGAAKAVLIVGAGRNFIAGADIREFGKTPQPPSLPEACLKIENCTKPVVAAIHGAALGGGLEVALSAHYRLASPTAKLGLPEVALGLLPGSGGTQRAPRLIGVKPALELMLSGRHAGAKEALSLGLVDRLGNDADALAEGLAYANELVAAKAPVRRTRDAGALADKEASRAALEAARADTAKKSRGLFSPMKIIEAVEGALTLPFDEGMALERKLFLQCIDSPQRAGLIHAFFAEREVLKAPETRSAKPRPLESAGIVGGGTMGAGIAVAMLDAGMPVTMIERDDTQLARGRANVEKVYDGLIKKGRLTPEAKAAVMARFSGSTSYDALASVDIVVEAVFEEMGVKKAVFAELDRVCKRGAVLATNTSYLDIDEIAASISRPQDVVGLHFFSPANIMKLLEIVVPAKVSADVVATGFELAKKLKKVPVRAGVCDGFIGNRILAVYRQAADHMMEDGASPYQIDEAVRNFGYPMGPFQVSDLAGGDIGWATRKRKAATRDPEARYVQVADRICERGWFGQKTQRGYYLYPEGARTGVPDPEVLAIIDAERERAGIKPRAFTEEEIMRRYMAAMINEGANVVLQRIALRPLDVDVTFLYGYGFPRHRGGPMKYADTVGLPKVLADIQEFAKEDPIFWKPSPLLVQLVERGADFASLNQSE*