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cn_combo_scaffold_120_18

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: 20334..21071

Top 3 Functional Annotations

Value Algorithm Source
Peptidoglycan-binding domain 1 protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6VAK3_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 62.8
  • Coverage: 242.0
  • Bit_score: 291
  • Evalue 6.80e-76
peptidoglycan-binding domain 1 protein similarity KEGG
DB: KEGG
  • Identity: 62.8
  • Coverage: 242.0
  • Bit_score: 291
  • Evalue 1.90e-76
Peptidoglycan-binding domain 1 protein {ECO:0000313|EMBL:ADU35113.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovo similarity UNIPROT
DB: UniProtKB
  • Identity: 62.8
  • Coverage: 242.0
  • Bit_score: 291
  • Evalue 9.50e-76

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 738
ATGCCGATGACCACGCTCAAACAGGGTTGGCGCGGAGCCGACGTCCGGCGTCTGCAGGAAGCGCTCAACCGCAAGCTGCAGCCCAGCCCCGCGCTCGTCACCGACGGCGACTACGGCCCGCGCACCCGCGCCGCCGTGCTGCGCCTGCAGGCCGTGCACTGGCTGGTGGAAGACGGCGAGGCCGGCCCCTGCACCCAGAACGTCGCCTTCGACGGCGAGGGCGACGCGCCCATCCTGCATCCGGTCGCGCTGATTCCGCCGCCGGCCGCGCCGCTGTGCTGGGCCGCGGGCGTCGCGATGATGACGCGCTCCAACGTGCGGGAAGTGGTCGCGCGCACCCCGGCGGAGCTGGTCGCGGCCGACGGCGGGCTGCAGGACTTCGTCGACACGCACGACGCGGGCATGGAGGGCGGCCGGCGCTTCGCGGCCGCGCACGGGCTCGAAGTGCGCCCGCCGCCGCCGTGGTCGCTGAAGGCGCTGCGTGCCGCGCTGCGGGAAGGCCCGCTCATGTTCGACATGCTCTGGGGCACCCGCGGCGGCTATGCGGATGGCGCCGGCCGGCCGGGCCACATGGTCGTCATCGCCGGCATTCGCGGCGACGCCGACCCGAGCGGGCGCGGCACCACGCTGCGCATCCTCGATTCCTGGCCGCCGAACAAGGGCGCGCGCAGCTCGGTCAACTTCTTCAAGTGGTTGCAGGGCGCCAGCTCGCGCACCTGCCGGGTGTTCAACAAATAG
PROTEIN sequence
Length: 246
MPMTTLKQGWRGADVRRLQEALNRKLQPSPALVTDGDYGPRTRAAVLRLQAVHWLVEDGEAGPCTQNVAFDGEGDAPILHPVALIPPPAAPLCWAAGVAMMTRSNVREVVARTPAELVAADGGLQDFVDTHDAGMEGGRRFAAAHGLEVRPPPPWSLKALRAALREGPLMFDMLWGTRGGYADGAGRPGHMVVIAGIRGDADPSGRGTTLRILDSWPPNKGARSSVNFFKWLQGASSRTCRVFNK*